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      Mesoscopic Patterns of Neural Activity Support Songbird Cortical Sequences

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          Abstract

          Time-locked sequences of neural activity can be found throughout the vertebrate forebrain in various species and behavioral contexts. From “time cells” in the hippocampus of rodents to cortical activity controlling movement, temporal sequence generation is integral to many forms of learned behavior. However, the mechanisms underlying sequence generation are not well known. Here, we describe a spatial and temporal organization of the songbird premotor cortical microcircuit that supports sparse sequences of neural activity. Multi-channel electrophysiology and calcium imaging reveal that neural activity in premotor cortex is correlated with a length scale of 100 µm. Within this length scale, basal-ganglia–projecting excitatory neurons, on average, fire at a specific phase of a local 30 Hz network rhythm. These results show that premotor cortical activity is inhomogeneous in time and space, and that a mesoscopic dynamical pattern underlies the generation of the neural sequences controlling song.

          Abstract

          Cortical premotor activity during singing behavior in songbirds is correlated spatiotemporally over a length scale of 100 µm, with neurons and interneurons firing at opposite phases of a 30 Hz network rhythm. Read the Synopsis.

          Author Summary

          “Time cells” can be found throughout the vertebrate forebrain in various species and behavioral contexts. These neurons fire sparsely at precise times during a stereotyped behavior; however, how a neural circuit supports this remarkable property is not known. Here, we describe that the premotor neuronal circuit that is required in birds for singing—“HVC”—is organized in a spatial and temporal manner that supports sparse sequences of neural activity. During song, one class of principal neuron fires during a specific phase of a 30 Hz network rhythm. Fluorescent imaging using head-mounted microscopes reveals that calcium activity in nearby principal neurons is correlated in time with a length scale of 100 μm. Thus, variations in the phase or precise timing of the network rhythm across HVC can provide a mechanism for coordinating the activity of principal neurons. This observation suggests that the timing of principal cells is supported by a mesoscopic spatiotemporal pattern of neural activity.

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          Most cited references38

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          Unsupervised spike detection and sorting with wavelets and superparamagnetic clustering.

          This study introduces a new method for detecting and sorting spikes from multiunit recordings. The method combines the wavelet transform, which localizes distinctive spike features, with superparamagnetic clustering, which allows automatic classification of the data without assumptions such as low variance or gaussian distributions. Moreover, an improved method for setting amplitude thresholds for spike detection is proposed. We describe several criteria for implementation that render the algorithm unsupervised and fast. The algorithm is compared to other conventional methods using several simulated data sets whose characteristics closely resemble those of in vivo recordings. For these data sets, we found that the proposed algorithm outperformed conventional methods.
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            Long-term dynamics of CA1 hippocampal place codes

            Via Ca2+-imaging in freely behaving mice that repeatedly explored a familiar environment, we tracked thousands of CA1 pyramidal cells' place fields over weeks. Place coding was dynamic, for each day the ensemble representation of this environment involved a unique subset of cells. Yet, cells within the ∼15–25% overlap between any two of these subsets retained the same place fields, which sufficed to preserve an accurate spatial representation across weeks.
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              Choice-specific sequences in parietal cortex during a virtual-navigation decision task

              The posterior parietal cortex (PPC) plays an important role in many cognitive behaviors; however, the neural circuit dynamics underlying PPC function are not well understood. Here we optically imaged the spatial and temporal activity patterns of neuronal populations in mice performing a PPC-dependent task that combined a perceptual decision and memory-guided navigation in a virtual environment. Individual neurons had transient activation staggered relative to one another in time, forming a sequence of neuronal activation spanning the entire length of a task trial. Distinct sequences of neurons were triggered on trials with opposite behavioral choices and defined divergent, choice-specific trajectories through a state space of neuronal population activity. Cells participating in the different sequences and at distinct time points in the task were anatomically intermixed over microcircuit length scales (< 100 micrometers). During working memory decision tasks the PPC may therefore perform computations through sequence-based circuit dynamics, rather than long-lived stable states, implemented using anatomically intermingled microcircuits.
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                Author and article information

                Contributors
                Role: Academic Editor
                Journal
                PLoS Biol
                PLoS Biol
                plos
                plosbiol
                PLoS Biology
                Public Library of Science (San Francisco, CA USA )
                1544-9173
                1545-7885
                3 June 2015
                June 2015
                : 13
                : 6
                : e1002158
                Affiliations
                [1 ]Department of Cognitive and Neural Systems, Boston University, Boston, Massachusetts, United States of America
                [2 ]Department of Biology, Boston University, Boston, Massachusetts, United States of America
                [3 ]Program in Neuroscience, Harvard University, Boston, Massachusetts, United States of America
                [4 ]Department of Neurobiology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America
                [5 ]Department of Biomedical Engineering, Boston University, Boston, Massachusetts, United States of America
                University of Minnesota, UNITED STATES
                Author notes

                The authors have declared that no competing interests exist.

                Conceived and designed the experiments: JEM WAL TJG. Performed the experiments: JEM WAL GG. Analyzed the data: JEM WAL. Contributed reagents/materials/analysis tools: TV CL. Wrote the paper: JEM WAL TJG.

                Article
                PBIOLOGY-D-14-03903
                10.1371/journal.pbio.1002158
                4454690
                26039895
                a160f738-ec5d-45bc-9d32-3eb09977e282
                Copyright @ 2015

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited

                History
                : 6 November 2014
                : 22 April 2015
                Page count
                Figures: 8, Tables: 0, Pages: 20
                Funding
                This work was supported by the National Science Foundation ( http://www.nsf.gov/) Science of Learning Center CELEST (grant number SBE-0354378), the National Institutes of Health ( http://www.nih.gov/) (grant number 1R01NS089679), by a Career Award at the Scientific Interface from the Burroughs Wellcome Fund ( http://www.bwfund.org/) and a Smith Family award ( http://www.hria.org/tmfgrants/smith/) to TJG. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Custom metadata
                All data used in this study are available on figshare ( http://dx.doi.org/10.6084/m9.figshare.1328060).

                Life sciences
                Life sciences

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