14
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Genome Editing of Pigs for Agriculture and Biomedicine

      review-article
      * , *
      Frontiers in Genetics
      Frontiers Media S.A.
      pig, genome editing, ZFN, TALEN, CRISPR/Cas9, disease model, xenotransplantation, breeding

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Pigs serve as an important agricultural resource and animal model in biomedical studies. Efficient and precise modification of pig genome by using recently developed gene editing tools has significantly broadened the application of pig models in various research areas. The three types of site-specific nucleases, namely, zinc-finger nucleases, transcription activator-like effector nucleases, and clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein, are the main gene editing tools that can efficiently introduce predetermined modifications, including knockouts and knockins, into the pig genome. These modifications can confer desired phenotypes to pigs to improve production traits, such as optimal meat production, enhanced feed digestibility, and disease resistance. Besides, given their genetic, anatomic, and physiologic similarities to humans, pigs can also be modified to model human diseases or to serve as an organ source for xenotransplantation to save human lives. To date, many genetically modified pig models with agricultural or biomedical values have been established by using gene editing tools. These pig models are expected to accelerate research progress in related fields and benefit humans.

          Related collections

          Most cited references88

          • Record: found
          • Abstract: found
          • Article: found
          Is Open Access

          Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting

          TALENs are important new tools for genome engineering. Fusions of transcription activator-like (TAL) effectors of plant pathogenic Xanthomonas spp. to the FokI nuclease, TALENs bind and cleave DNA in pairs. Binding specificity is determined by customizable arrays of polymorphic amino acid repeats in the TAL effectors. We present a method and reagents for efficiently assembling TALEN constructs with custom repeat arrays. We also describe design guidelines based on naturally occurring TAL effectors and their binding sites. Using software that applies these guidelines, in nine genes from plants, animals and protists, we found candidate cleavage sites on average every 35 bp. Each of 15 sites selected from this set was cleaved in a yeast-based assay with TALEN pairs constructed with our reagents. We used two of the TALEN pairs to mutate HPRT1 in human cells and ADH1 in Arabidopsis thaliana protoplasts. Our reagents include a plasmid construct for making custom TAL effectors and one for TAL effector fusions to additional proteins of interest. Using the former, we constructed de novo a functional analog of AvrHah1 of Xanthomonas gardneri. The complete plasmid set is available through the non-profit repository AddGene and a web-based version of our software is freely accessible online.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            A TALE nuclease architecture for efficient genome editing.

            Nucleases that cleave unique genomic sequences in living cells can be used for targeted gene editing and mutagenesis. Here we develop a strategy for generating such reagents based on transcription activator-like effector (TALE) proteins from Xanthomonas. We identify TALE truncation variants that efficiently cleave DNA when linked to the catalytic domain of FokI and use these nucleases to generate discrete edits or small deletions within endogenous human NTF3 and CCR5 genes at efficiencies of up to 25%. We further show that designed TALEs can regulate endogenous mammalian genes. These studies demonstrate the effective application of designed TALE transcription factors and nucleases for the targeted regulation and modification of endogenous genes.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Targeting DNA double-strand breaks with TAL effector nucleases.

              Engineered nucleases that cleave specific DNA sequences in vivo are valuable reagents for targeted mutagenesis. Here we report a new class of sequence-specific nucleases created by fusing transcription activator-like effectors (TALEs) to the catalytic domain of the FokI endonuclease. Both native and custom TALE-nuclease fusions direct DNA double-strand breaks to specific, targeted sites.
                Bookmark

                Author and article information

                Contributors
                Journal
                Front Genet
                Front Genet
                Front. Genet.
                Frontiers in Genetics
                Frontiers Media S.A.
                1664-8021
                04 September 2018
                2018
                : 9
                : 360
                Affiliations
                National Engineering Research Center for Breeding Swine Industry, College of Animal Science, South China Agricultural University , Guangzhou, China
                Author notes

                Edited by: Kun Xu, Northwest A&F University, China

                Reviewed by: Dengke Pan, Beijing Academy of Agriculture and Forestry Sciences, China; Angelika Schnieke, Technische Universität München, Germany

                *Correspondence: Huaqiang Yang, yangh@ 123456scau.edu.cn Zhenfang Wu, wzfemail@ 123456163.com

                This article was submitted to Genomic Assay Technology, a section of the journal Frontiers in Genetics

                Article
                10.3389/fgene.2018.00360
                6131568
                30233645
                9eb3afb9-111a-4d90-93f1-cba4ba207925
                Copyright © 2018 Yang and Wu.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 28 April 2018
                : 21 August 2018
                Page count
                Figures: 1, Tables: 0, Equations: 0, References: 137, Pages: 12, Words: 0
                Categories
                Genetics
                Review

                Genetics
                pig,genome editing,zfn,talen,crispr/cas9,disease model,xenotransplantation,breeding
                Genetics
                pig, genome editing, zfn, talen, crispr/cas9, disease model, xenotransplantation, breeding

                Comments

                Comment on this article