1
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: not found

      Deep Learning Methods for Chest Disease Detection Using Radiography Images

      research-article

      Read this article at

      ScienceOpenPublisherPMC
      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          X-ray images are the most widely used medical imaging modality. They are affordable, non-dangerous, accessible, and can be used to identify different diseases. Multiple computer-aided detection (CAD) systems using deep learning (DL) algorithms were recently proposed to support radiologists in identifying different diseases on medical images. In this paper, we propose a novel two-step approach for chest disease classification. The first is a multi-class classification step based on classifying X-ray images by infected organs into three classes (normal, lung disease, and heart disease). The second step of our approach is a binary classification of seven specific lungs and heart diseases. We use a consolidated dataset of 26,316 chest X-ray (CXR) images. Two deep learning methods are proposed in this paper. The first is called DC-ChestNet. It is based on ensembling deep convolutional neural network (DCNN) models. The second is named VT-ChestNet. It is based on a modified transformer model. VT-ChestNet achieved the best performance overcoming DC-ChestNet and state-of-the-art models (DenseNet121, DenseNet201, EfficientNetB5, and Xception). VT-ChestNet obtained an area under curve (AUC) of 95.13% for the first step. For the second step, it obtained an average AUC of 99.26% for heart diseases and an average AUC of 99.57% for lung diseases.

          Related collections

          Most cited references7

          • Record: found
          • Abstract: found
          • Article: found
          Is Open Access

          MIMIC-CXR, a de-identified publicly available database of chest radiographs with free-text reports

          Chest radiography is an extremely powerful imaging modality, allowing for a detailed inspection of a patient’s chest, but requires specialized training for proper interpretation. With the advent of high performance general purpose computer vision algorithms, the accurate automated analysis of chest radiographs is becoming increasingly of interest to researchers. Here we describe MIMIC-CXR, a large dataset of 227,835 imaging studies for 65,379 patients presenting to the Beth Israel Deaconess Medical Center Emergency Department between 2011–2016. Each imaging study can contain one or more images, usually a frontal view and a lateral view. A total of 377,110 images are available in the dataset. Studies are made available with a semi-structured free-text radiology report that describes the radiological findings of the images, written by a practicing radiologist contemporaneously during routine clinical care. All images and reports have been de-identified to protect patient privacy. The dataset is made freely available to facilitate and encourage a wide range of research in computer vision, natural language processing, and clinical data mining.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Preparing a collection of radiology examinations for distribution and retrieval.

            Clinical documents made available for secondary use play an increasingly important role in discovery of clinical knowledge, development of research methods, and education. An important step in facilitating secondary use of clinical document collections is easy access to descriptions and samples that represent the content of the collections. This paper presents an approach to developing a collection of radiology examinations, including both the images and radiologist narrative reports, and making them publicly available in a searchable database.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              The prostate, lung, colorectal, and ovarian cancer screening trial and its associated research resource.

              The Prostate, Lung, Colorectal, and Ovarian (PLCO) Cancer Screening Trial is a large-scale research effort conducted by the National Cancer Institute. PLCO offers an example of coordinated research by both the extramural and intramural communities of the National Institutes of Health. The purpose of this article is to describe the PLCO research resource and how it is managed and to assess the productivity and the costs associated with this resource. Such an in-depth analysis of a single large-scale project can shed light on questions such as how large-scale projects should be managed, what metrics should be used to assess productivity, and how costs can be compared with productivity metrics. A comprehensive publication analysis identified 335 primary research publications resulting from research using PLCO data and biospecimens from 2000 to 2012. By the end of 2012, a total of 9679 citations (excluding self-citations) have resulted from this body of research publications, with an average of 29.7 citations per article, and an h index of 45, which is comparable with other large-scale studies, such as the Nurses' Health Study. In terms of impact on public health, PLCO trial results have been used by the US Preventive Services Task Force in making recommendations concerning prostate and ovarian cancer screening. The overall cost of PLCO was $454 million over 20 years, adjusted to 2011 dollars, with approximately $37 million for the collection, processing, and storage of biospecimens, including blood samples, buccal cells, and pathology tissues.
                Bookmark

                Author and article information

                Contributors
                eaa3027@umoncton.ca
                moulay.akhloufi@umoncton.ca
                Journal
                SN Comput Sci
                SN Comput Sci
                Sn Computer Science
                Springer Nature Singapore (Singapore )
                2662-995X
                2661-8907
                11 May 2023
                2023
                : 4
                : 4
                : 388
                Affiliations
                GRID grid.265686.9, ISNI 0000 0001 2175 1792, Perception, Robotics, and Intelligent Machines (PRIME), , Université de Moncton, ; Moncton, NB E1C 3E9 Canada
                Author information
                http://orcid.org/0000-0003-1800-5208
                Article
                1818
                10.1007/s42979-023-01818-w
                10173935
                95beae6f-1acc-448f-97ac-ce3232bdcb73
                © The Author(s), under exclusive licence to Springer Nature Singapore Pte Ltd 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.

                This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.

                History
                : 21 December 2022
                : 4 April 2023
                Categories
                Original Research
                Custom metadata
                © Springer Nature Singapore Pte Ltd 2023

                x-rays,computer-aided detection,deep learning,deep convolutional neural network,ensemble learning,vision transformers

                Comments

                Comment on this article