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      Different influences of phylogenetically conserved and independent floral traits on plant functional specialization and pollination network structure

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          Abstract

          Plant specialization and pollination network structure play important roles in community assembly. Floral traits can mediate plant–pollinator interactions and thus have important impacts on nestedness and modularity of pollination network. When such traits are phylogenetically conserved, therefore, phylogeny and traits should predict network structure to similar degrees. Moreover, conserved network structures were also found attributed to pollination syndrome or pollination system. However, we still know little about the relation between pollination syndrome and pollination network, especially under a phylogenetic framework. Herein, we established a phylogenetic framework including five floral traits (flower density, floral size, floral shape, floral symmetry, and floral color) and five species-level metrics (species strength, weighted closeness, specialization d’, nestedness contribution, and modularity contribution) to test how floral traits could directly or indirectly influence species’ specialization and network structure in central China. Phylogenetic signals were found in all floral traits except flower density. Structural equation model and phylogenetic structural equation model results showed that both floral size and floral density affected plant specialization and its contribution to network modularity indirectly. However, compared with phylogenetic independent flower density, phylogenetic conserved floral size had much more complexed influences, having a direct influence both on species’ specialization and on modularity contribution. In this nested and modular network, abundant species with larger flowers tend to be more central and had larger values of z. Floral shape, symmetry, and color could act as co-flowering filters in pollination sharing and help to shape network modularity. Our results emphasize that phylogenetically conserved traits partially represent pollination syndrome and are important drivers for modular structure of local pollination network. This study may improve the understanding how the evolutionary history and ecological process drive local network structure and dynamics.

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          Complex heatmaps reveal patterns and correlations in multidimensional genomic data.

          Parallel heatmaps with carefully designed annotation graphics are powerful for efficient visualization of patterns and relationships among high dimensional genomic data. Here we present the ComplexHeatmap package that provides rich functionalities for customizing heatmaps, arranging multiple parallel heatmaps and including user-defined annotation graphics. We demonstrate the power of ComplexHeatmap to easily reveal patterns and correlations among multiple sources of information with four real-world datasets.
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            Picante is a software package that provides a comprehensive set of tools for analyzing the phylogenetic and trait diversity of ecological communities. The package calculates phylogenetic diversity metrics, performs trait comparative analyses, manipulates phenotypic and phylogenetic data, and performs tests for phylogenetic signal in trait distributions, community structure and species interactions. Picante is a package for the R statistical language and environment written in R and C, released under a GPL v2 open-source license, and freely available on the web (http://picante.r-forge.r-project.org) and from CRAN (http://cran.r-project.org).
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              piecewiseSEM: Piecewise structural equation modelling inr for ecology, evolution, and systematics

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                Author and article information

                Contributors
                Journal
                Front Plant Sci
                Front Plant Sci
                Front. Plant Sci.
                Frontiers in Plant Science
                Frontiers Media S.A.
                1664-462X
                24 January 2023
                2023
                : 14
                : 1084995
                Affiliations
                [1] 1 Hubei Provincial Key Laboratory for Protection and Application of Special Plant Germplasm in Wuling Area of China, College of Life Sciences, South-Central Minzu University, Wuhan , Hubei, China
                [2] 2 State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-Resources, Hubei Key Laboratory of Industrial Biotechnology, School of Life Sciences, Hubei University , Wuhan, China
                Author notes

                Edited by: Mingxun Ren, Hainan University, China

                Reviewed by: Wang Linlin, Kunming Institute of Botany (CAS), China; Shao-Jun Ling, Hainan University, China

                *Correspondence: Jing Xia, meir_xj@ 123456mail.scuec.edu.cn

                †These authors have contributed equally to this work and share first authorship

                This article was submitted to Plant Bioinformatics, a section of the journal Frontiers in Plant Science

                Article
                10.3389/fpls.2023.1084995
                9902514
                94351add-b346-463b-b9cc-87d1837d82f8
                Copyright © 2023 Xiang, Jiang, Lan, Huang, Hao, Liu and Xia

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 31 October 2022
                : 03 January 2023
                Page count
                Figures: 2, Tables: 0, Equations: 0, References: 86, Pages: 12, Words: 7093
                Funding
                Funded by: National Natural Science Foundation of China , doi 10.13039/501100001809;
                Award ID: 31670229
                This work was supported by the National Natural Science Foundation of China (31670229 to JX).
                Categories
                Plant Science
                Original Research

                Plant science & Botany
                phylogenetically conserved floral traits,phylogenetically independent floral traits,floral size,flower density,plant specialization,pollination network

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