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      Editorial: Community series in insights into new strategies to combat biofilms, volume II

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          Abstract

          The emergence of antibiotic-resistant bacteria has become a major concern in healthcare and public health. It is particularly challenging to treat ESKAPE pathogens as they can form biofilms, which are about 1,000 times more resistant to antimicrobials as compared to planktonic cells. Therefore, alternative strategies are urgently needed to combat these pathogens (Roy et al., 2018; Tiwari, 2019; Panda et al., 2021). Biofilms form a complex layer with defined structures that attach on biotic or abiotic surfaces; they are particularly tough to eradicate and tend to cause resistance against most antibiotics (Sahoo et al., 2021). In general, biofilm-associated infections are a major public health concern, and the development of novel and effective strategies to combat them is essential. In the second edition of this Research Topic, five additional articles describing alternatives to treat biofilms have been published and are introduced here. Boya et al. screened 83 indole derivatives to find compounds with antibiofilm activities against Uropathogenic Escherichia coli (UPEC). Among the screened compounds, chloroindoles-4-chloroindole (4CI), 5-chloroindole (5CI), and 5-chloro 2-methyl indole (5CMI) were indicated as the most active molecules as they showed minimum inhibitory concentrations (MICs) of 75 μg/mL, and inhibited more than 64% of UPEC biofilm formation at 20 μg/mL concentration. In addition to antibiofilm properties, the compounds showed activity against motility, curli formation, cell surface hydrophobicity (which favors bacterial adhesion to various surfaces), and indole production. Moreover, in the presence of indole compounds, the expression of other virulence genes, such as those involved in adhesion (e.g., papA), stress regulation (e.g., csrA), and iron uptake (e.g., entE), was downregulated. These findings render the molecules of great interest, especially for the treatment of polymicrobial biofilms. In recently reviewed literature by Panda et al. the role of natural molecules such as antimicrobial peptides, bacteriophage endolysin, and essential oils against the biofilms formed by ESKAPE pathogens has also been discussed. The major focus of the review is on the anti-biofilm activity of the essential oils and their components. This review also critically discussed the other mode of actions i.e., disruption of biofilm and their inhibitory concentrations, expression of genes involved, other virulence factors etc. Tea oil, eugenol, citral, carvacrol, (+)-limonene were found to inhibit biofilm in methicillin resistant Staphylococcus aureus (MRSA). With transcriptome analysis, both tea oil and eugenol, confirmed the involvement of sarA gene (encodes the DNA-binding protein SarA), which is downregulated, and responsible for biofilm formation (Zhao et al., 2018) in addition to other genes e.g., enterotoxin gene (seA), and adhesion gene (icaD) (Yadav et al., 2015). Cinnamaldehyde is able to reduce biofilm in Gram-negative bacteria e.g., Pseudomonas aeruginosa, due to the probable reduction of N-acyl-homoserine lactone (AHLs) production (Chang et al., 2014), while was later confirmed that the inhibition is not due to its anti-quorum Sensing effect, but to its cytotoxic effects (Firmino et al., 2018). Interestingly, various nanotechnology-based approaches have been developed to combat biofilms, including nanoparticles, nanofibers, and nanocoating (Al-Jamal and Kostarelos, 2011). Mohanta et al. discussed the potential of nanotechnology-based approaches to overcome antibiotic resistance and enhance the efficacy of conventional antimicrobial agents and the related challenges. Authors have addressed issues such as toxicity, stability, and biocompatibility of nanomaterials. They have also discussed potential solutions to these challenges, such as developing targeted nanomaterials and using appropriate quality control measures. In a paper, Kaul et al. investigated the antibiofilm and antimicrobial properties of combinational therapy with Diethyldithiocarbamate (DDC) and Cu2+ complex against Staphylococcus aureus and Staphylococcus epidermidis biofilms. DDC is the metabolite of disulfiram and an FDA-approved drug for oral treatment of chronic alcoholism, which was previously investigated for its antifungal and anti-bacterial properties. Initially, the authors reported that anti-S. epidermidis action of DDC was substantially increased in the presence of Cu2+. Further, authors showed the combination of DDC and Cu2+ at different proportions could disturb the mature biofilms (24 h) formed by S. epidermidis or S. aureus strains. The combination also prevents bacterial attachment, biofilm growth under flow conditions and showed synergistic and additive effects with different classes of antibiotics. The combination was able to prolong the lifespan of Galleria mellonella larvae infected by S. epidermidis or MRSA strains. The authors' hypothesis for the antibacterial action of Cu (DDC)2 complex is the inhibition of the efflux transporter, one of the copper homeostasis components, leading to toxicity mediated by Cu2+ accumulation into bacteria. Furthermore, the excess Cu2+ could down-regulate the expression of agr and sae and other positive biofilm formation regulators. Interestingly, in another study, Andriani et al. reported that BTU01 (a derivative of N-butylcarbamothioyl benzamide) exhibited antifungal activity with MIC (31.25–62.5 μg/mL) for planktonic cells, and 2 to 4-fold higher for sessile cells of Cryptococcus neoformans (125–1,000 μg/mL), being not toxic to mammalian cells. Due to its potent activity, as well as synergetic interaction with Amphotericin-B, authors followed up molecular docking studies and interesting results showed a strong interaction with enzyme-urease. Microscopic studies (Confocal laser scanning microscopy) also confirmed the reduction in the cell numbers and capsule size in planktonic state when treated alone or in combination with Amphotericin-B. All these in vitro results are interesting and further studies warrant an in vivo model with the mechanism of action to develop this thiourea derivative as a novel drug to control C. neoformans infections. In conclusion, the emergence of antibiotic-resistant bacteria has led to the urgent need for alternative strategies specially to combat biofilms. Various approaches, such as essential oils, nanotechnology-based tools, and combinational therapy have shown promising in combating bacterial and fungal biofilms. The search for novel molecules and natural compounds that can lower virulence and reduce the expression of virulence genes continues. Further research is needed to optimize these approaches, enhance their efficacy and safety, and translate them into clinical practice. In the end, we would like to thank all the reviewers for their comments that improved our manuscripts, and the authors for their excellent contributions. We hope that this article Research Topic will inspire scientists from different fields of research focusing on biofilm. Author contributions All authors listed have made a substantial, direct, and intellectual contribution to the work and approved it for publication.

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          Most cited references9

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          Strategies for combating bacterial biofilms: A focus on anti-biofilm agents and their mechanisms of action

          ABSTRACT Biofilm refers to the complex, sessile communities of microbes found either attached to a surface or buried firmly in an extracellular matrix as aggregates. The biofilm matrix surrounding bacteria makes them tolerant to harsh conditions and resistant to antibacterial treatments. Moreover, the biofilms are responsible for causing a broad range of chronic diseases and due to the emergence of antibiotic resistance in bacteria it has really become difficult to treat them with efficacy. Furthermore, the antibiotics available till date are ineffective for treating these biofilm related infections due to their higher values of minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC), which may result in in-vivo toxicity. Hence, it is critically important to design or screen anti-biofilm molecules that can effectively minimize and eradicate biofilm related infections. In the present article, we have highlighted the mechanism of biofilm formation with reference to different models and various methods used for biofilm detection. A major focus has been put on various anti-biofilm molecules discovered or tested till date which may include herbal active compounds, chelating agents, peptide antibiotics, lantibiotics and synthetic chemical compounds along with their structures, mechanism of action and their respective MICs, MBCs, minimum biofilm inhibitory concentrations (MBICs) as well as the half maximal inhibitory concentration (IC50) values available in the literature so far. Different mode of action of anti biofilm molecules addressed here are inhibition via interference in the quorum sensing pathways, adhesion mechanism, disruption of extracellular DNA, protein, lipopolysaccharides, exopolysaccharides and secondary messengers involved in various signaling pathways. From this study, we conclude that the molecules considered here might be used to treat biofilm-associated infections after significant structural modifications, thereby investigating its effective delivery in the host. It should also be ensured that minimum effective concentration of these molecules must be capable of eradicating biofilm infections with maximum potency without posing any adverse side effects on the host.
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            Liposomes: from a clinically established drug delivery system to a nanoparticle platform for theranostic nanomedicine.

            For decades, clinicians have used liposomes, self-assembled lipid vesicles, as nanoscale systems to deliver encapsulated anthracycline molecules for cancer treatment. The more recent proposition to combine liposomes with nanoparticles remains at the preclinical development stages; however, such hybrid constructs present great opportunities to engineer theranostic nanoscale delivery systems, which can combine simultaneous therapeutic and imaging functions. Many novel nanoparticles of varying chemical compositions are being developed in nanotechnology laboratories, but further chemical modification is often required to make these structures compatible with the biological milieu in vitro and in vivo. Such nanoparticles have shown promise as diagnostic and therapeutic tools and generally offer a large surface area that allows covalent and non-covalent surface functionalization with hydrophilic polymers, therapeutic moieties, and targeting ligands. In most cases, such surface manipulation diminishes the theranostic properties of nanoparticles and makes them less stable. From our perspective, liposomes offer structural features that can make nanoparticles biocompatible and present a clinically proven, versatile platform for further enhancement of the pharmacological and diagnostic efficacy of nanoparticles. In this Account, we describe two examples of liposome-nanoparticle hybrids developed as theranostics: liposome-quantum dot hybrids loaded with a cytotoxic drug (doxorubicin) and artificially enveloped adenoviruses. We incorporated quantum dots into lipid bilayers, which rendered them dispersible in physiological conditions. This overall vesicular structure allowed them to be loaded with doxorubicin molecules. These structures exhibited cytotoxic activity and labeled cells both in vitro and in vivo. In an alternative design, lipid bilayers assembled around non-enveloped viral nanoparticles and altered their infection tropism in vitro and in vivo with no chemical or genetic capsid modifications. Overall, we have attempted to illustrate how alternative strategies to incorporate nanoparticles into liposomal nanostructures can overcome some of the shortcomings of nanoparticles. Such hybrid structures could offer diagnostic and therapeutic combinations suitable for biomedical and even clinical applications.
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              Eugenol: A Phyto-Compound Effective against Methicillin-Resistant and Methicillin-Sensitive Staphylococcus aureus Clinical Strain Biofilms

              Background Inhibition and eradication of Staphylococcus aureus biofilms with conventional antibiotic is difficult, and the treatment is further complicated by the rise of antibiotic resistance among staphylococci. Consequently, there is a need for novel antimicrobials that can treat biofilm-related infections and decrease antibiotics burden. Natural compounds such as eugenol with anti-microbial properties are attractive agents that could reduce the use of conventional antibiotics. In this study we evaluated the effect of eugenol on MRSA and MSSA biofilms in vitro and bacterial colonization in vivo. Methods and Results Effect of eugenol on in vitro biofilm and in vivo colonization were studied using microtiter plate assay and otitis media-rat model respectively. The architecture of in vitro biofilms and in vivo colonization of bacteria was viewed with SEM. Real-time RT-PCR was used to study gene expression. Check board method was used to study the synergistic effects of eugenol and carvacrol on established biofilms. Eugenol significantly inhibited biofilms growth of MRSA and MSSA in vitro in a concentration-dependent manner. Eugenol at MIC or 2×MIC effectively eradicated the pre-established biofilms of MRSA and MSSA clinical strains. In vivo, sub-MIC of eugenol significantly decreased 88% S. aureus colonization in rat middle ear. Eugenol was observed to damage the cell-membrane and cause a leakage of the cell contents. At sub-inhibitory concentration, it decreases the expression of biofilm-and enterotoxin-related genes. Eugenol showed a synergistic effect with carvacrol on the eradication of pre-established biofilms. Conclusion/Major Finding This study demonstrated that eugenol exhibits notable activity against MRSA and MSSA clinical strains biofilms. Eugenol inhibited biofilm formation, disrupted the cell-to-cell connections, detached the existing biofilms, and killed the bacteria in biofilms of both MRSA and MSSA with equal effectiveness. Therefore, eugenol may be used to control or eradicate S. aureus biofilm-related infections.
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                Author and article information

                Contributors
                Journal
                Front Microbiol
                Front Microbiol
                Front. Microbiol.
                Frontiers in Microbiology
                Frontiers Media S.A.
                1664-302X
                27 June 2023
                2023
                : 14
                : 1198807
                Affiliations
                [1] 1Department of Biochemistry, Central University of Rajasthan, Ajmer , Rajasthan, India
                [2] 2Department of Biology and Biotechnology, University of Pavia , Pavia, Italy
                [3] 3Laboratory of Microbial Pathogenesis, Universidade Ceuma , São Luís, Brazil
                [4] 4Centre of Environment Climate Change and Public Health, Rashtriya Uchchatar Shiksha Abhiyan (RUSA) 2.0, Utkal University , Bhubaneswar, India
                Author notes

                Edited by: Rustam Aminov, University of Aberdeen, United Kingdom

                Reviewed by: Giuseppantonio Maisetta, University of Pisa, Italy

                *Correspondence: Vishvanath Tiwari vishvanath@ 123456curaj.ac.in
                Article
                10.3389/fmicb.2023.1198807
                10335791
                91305c72-69e1-45eb-a1d8-8202edf81cc8
                Copyright © 2023 Tiwari, Buroni, Silva and Panda.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 02 April 2023
                : 13 June 2023
                Page count
                Figures: 0, Tables: 0, Equations: 0, References: 9, Pages: 3, Words: 1702
                Categories
                Microbiology
                Editorial
                Custom metadata
                Antimicrobials, Resistance and Chemotherapy

                Microbiology & Virology
                biofilm,drug tolerance,combinational therapies,antifungal agents,antimicrobial agents

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