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      Using cerebrospinal fluid to confirm Angiostrongylus cantonensis as the cause of canine neuroangiostrongyliasis in Australia where A. cantonensis and Angiostrongylus mackerrasae co-exist

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          Abstract

          Both Angiostrongylus cantonensis and Angiostrongylus mackerrasae have been identified along the east coast of Australia. A lack of A. mackerrasae genomic data until 2019, however, has precluded the unequivocal identification of the Angiostrongylus species responsible for neuroangiostrongyliasis in accidental hosts such as dog and man. The availability of a whole-genome data for A. mackerrasae, including mtDNA and ITS2 rDNA, enables discrimination of A. cantonensis from A. mackerrasae. The aim of this study was to develop diagnostic PCR assays to determine the species of Angiostrongylus based on the detection of Angiostrongylus DNA sequences in the cerebrospinal fluid (CSF) of canine patients with eosinophilic meningitis. An in silico workflow utilising available cytochrome c oxidase 1 ( cox1) primers streamlined the laboratory work into empirical steps, allowing optimisation and selection of a PCR assay that met the required criteria for discrimination of A. cantonensis and A. mackerrasae DNA in low-template CSF samples. The adopted cox1 qPCR assay specifically amplified and enabled the differentiation of A. cantonensis from A. mackerrasae DNA and confirmed the presence of A. cantonensis DNA in 11/50 archived CSF samples. The DNA sequences demonstrated the presence of two distinct A. cantonensis cox1 haplotypes in dogs from eastern Australia. Species identification was further confirmed via the adoption of an ITS2 rDNA assay, providing confirmation of only A. cantonensis ITS2 rDNA in the CSF samples. To our knowledge, this is the first study to unequivocally demonstrate the antemortem presence of A. cantonensis DNA in CSF from clinically affected dogs. The study confirmed the long-held assumption that A. cantonensis is the causal agent of neuroangiostrongyliasis but refutes the dogma that there was a single introduction of A. cantonensis into Australia by the demonstration of two distinct A. cantonensis cox1 haplotypes.

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          Highlights

          • Adaptation of existing cox1 and ITS2 rDNA PCR assays detected Angiostrongylus DNA in the cerebrospinal fluid (CSF) of canine patients.

          • An in silico workflow enabled streamlined empiric laboratory steps for cox1 PCR optimisation to discriminate Angiostrongylus mackerrasae and Angiostrongylus cantonensis.

          • A. cantonensis but not A. mackerrasae was demonstrated in CSF specimens from clinically affected dogs.

          • The presence of two distinct A. cantonensis cox1 haplotypes was identified, suggesting multiple introductions into Australia.

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          Biological identifications through DNA barcodes.

          Although much biological research depends upon species diagnoses, taxonomic expertise is collapsing. We are convinced that the sole prospect for a sustainable identification capability lies in the construction of systems that employ DNA sequences as taxon 'barcodes'. We establish that the mitochondrial gene cytochrome c oxidase I (COI) can serve as the core of a global bioidentification system for animals. First, we demonstrate that COI profiles, derived from the low-density sampling of higher taxonomic categories, ordinarily assign newly analysed taxa to the appropriate phylum or order. Second, we demonstrate that species-level assignments can be obtained by creating comprehensive COI profiles. A model COI profile, based upon the analysis of a single individual from each of 200 closely allied species of lepidopterans, was 100% successful in correctly identifying subsequent specimens. When fully developed, a COI identification system will provide a reliable, cost-effective and accessible solution to the current problem of species identification. Its assembly will also generate important new insights into the diversification of life and the rules of molecular evolution.
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            Hybridization, introgression, and the nature of species boundaries.

            Species can be defined as populations that are diagnosably distinct, reproductively isolated, cohesive, or exclusive groups of organisms. Boundaries between species in sympatry are maintained by intrinsic barriers to gene exchange; these boundaries may not be uniform in space, in time, or across the genome. Here, we explore the nature of the species boundary, defined as the phenotypes/genes/genome regions that remain differentiated in the face of potential hybridization and introgression. We emphasize that species boundaries are semipermeable, with permeability (gene exchange) being a function of genome region. The early evidence for semipermeable species boundaries came from data on differential introgression in hybrid zones. This "genic view" of species was common in the hybrid zone literature even when few molecular markers were available to characterize genome-wide patterns of variation. Now, molecular tools allow detailed characterization of differentiation between diverging lineages and patterns of variation across natural hybrid zones, but the questions being asked by evolutionary biologists have remained much the same. Recent data (from DNA sequences and genotypes) reinforce earlier conclusions about the semipermeable nature of most species boundaries. However, debate persists over the nature and extent of genome divergence that accompanies speciation.
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              The incomplete natural history of mitochondria

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                Author and article information

                Contributors
                Journal
                Curr Res Parasitol Vector Borne Dis
                Curr Res Parasitol Vector Borne Dis
                Current Research in Parasitology & Vector-borne Diseases
                Elsevier
                2667-114X
                01 June 2021
                2021
                01 June 2021
                : 1
                : 100033
                Affiliations
                [a ]Sydney School of Veterinary Science, Faculty of Science, University of Sydney, 2006, New South Wales, Australia
                [b ]Molecular Parasitology Laboratory, Centre for One Health Ryan Institute, National University of Ireland, Galway, H91 DK59, Galway, Ireland
                [c ]Parasitology Laboratory, Centre for Infectious Diseases and Microbiology Lab Services, NSW Health Pathology, Level 3 ICPMR, Westmead Hospital, 2145, New South Wales, Australia
                [d ]Centre for Veterinary Education, University of Sydney, 2006, New South Wales, Australia
                Author notes
                [] Corresponding author. jan.slapeta@ 123456sydney.edu.au
                Article
                S2667-114X(21)00027-3 100033
                10.1016/j.crpvbd.2021.100033
                8906064
                35284889
                8fcfe71d-9e29-402d-a007-419ec3740b24
                © 2021 The Author(s)

                This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

                History
                : 17 May 2021
                : 26 May 2021
                Categories
                Research Article

                rat lungworm,dogs,haplotype,validation,csf,mitochondrial dna,molecular diagnostics

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