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      Toward systematic review automation: a practical guide to using machine learning tools in research synthesis

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          Abstract

          Technologies and methods to speed up the production of systematic reviews by reducing the manual labour involved have recently emerged. Automation has been proposed or used to expedite most steps of the systematic review process, including search, screening, and data extraction. However, how these technologies work in practice and when (and when not) to use them is often not clear to practitioners. In this practical guide, we provide an overview of current machine learning methods that have been proposed to expedite evidence synthesis. We also offer guidance on which of these are ready for use, their strengths and weaknesses, and how a systematic review team might go about using them in practice.

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              End-to-end Sequence Labeling via Bi-directional LSTM-CNNs-CRF

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                Author and article information

                Contributors
                iain.marshall@kcl.ac.uk
                b.wallace@northeastern.edu
                Journal
                Syst Rev
                Syst Rev
                Systematic Reviews
                BioMed Central (London )
                2046-4053
                11 July 2019
                11 July 2019
                2019
                : 8
                : 163
                Affiliations
                [1 ]ISNI 0000 0001 2322 6764, GRID grid.13097.3c, School of Population Health & Environmental Sciences, Faculty of Life Sciences and Medicine, , King’s College London, ; 3rd Floor, Addison House, Guy’s Campus, London, SE1 1UL UK
                [2 ]ISNI 0000 0001 2173 3359, GRID grid.261112.7, Khoury College of Computer Sciences, , Northeastern University, ; 202 WVH, 360 Huntington Avenue, Boston, MA 02115 USA
                Author information
                http://orcid.org/0000-0003-2594-2654
                Article
                1074
                10.1186/s13643-019-1074-9
                6621996
                31296265
                8b16489d-67ec-4426-adef-d75468be5d20
                © The Author(s). 2019

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 18 January 2019
                : 24 June 2019
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100000265, Medical Research Council;
                Award ID: MR/N015185/1
                Funded by: FundRef http://dx.doi.org/10.13039/100000092, U.S. National Library of Medicine;
                Award ID: R01‐LM012086‐01A1
                Award ID: R01‐LM012086‐01A1
                Award Recipient :
                Categories
                Commentary
                Custom metadata
                © The Author(s) 2019

                Public health
                machine learning,natural language processing,evidence synthesis
                Public health
                machine learning, natural language processing, evidence synthesis

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