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      In situ monitoring of Lentilactobacillus parabuchneri biofilm formation via real-time infrared spectroscopy

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          Abstract

          Foodborne pathogenic microorganisms form biofilms at abiotic surfaces, which is a particular challenge in food processing industries. The complexity of biofilm formation requires a fundamental understanding on the involved molecular mechanisms, which may then lead to efficient prevention strategies. In the present study, biogenic amine producing bacteria, i.e., Lentilactobacillus parabuchneri DSM 5987 strain isolated from cheese were studied in respect with biofilm formation, which is of substantial relevance given their contribution to the presence of histamine in dairy products. While scanning electron microscopy was used to investigate biofilm adhesion at stainless steel surfaces, in situ infrared attenuated total reflection spectroscopy (IR-ATR) using a custom flow-through assembly was used for real-time and non-destructive observations of biofilm formation during a period of several days. The spectral window of 1700–600 cm −1 provides access to vibrational signatures characteristic for identifying and tracking L. parabuchneri biofilm formation and maturation. Especially, the amide I and II bands, lactic acid produced as the biofilm matures, and a pronounced increase of bands characteristic for extracellular polymeric substances (EPS) provide molecular insight into biofilm formation, maturation, and changes in biofilm architecture. Finally, multivariate data evaluation strategies were applied facilitating the unambiguous classification of the observed biofilm changes via IR spectroscopic data.

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          Most cited references85

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          Extracellular polymeric substances (EPS) of microbial aggregates in biological wastewater treatment systems: a review.

          A review concerning the definition, extraction, characterization, production and functions of extracellular polymeric substances (EPS) of microbial aggregates in biological wastewater treatment reactors is given in this paper. EPS are a complex high-molecular-weight mixture of polymers excreted by microorganisms, produced from cell lysis and adsorbed organic matter from wastewater. They are a major component in microbial aggregates for keeping them together in a three-dimensional matrix. Their characteristics (e.g., adsorption abilities, biodegradability and hydrophilicity/hydrophobicity) and the contents of the main components (e.g., carbohydrates, proteins, humic substances and nucleic acids) in EPS are found to crucially affect the properties of microbial aggregates, such as mass transfer, surface characteristics, adsorption ability, stability, the formation of microbial aggregates etc. However, as EPS are very complex, the knowledge regarding EPS is far from complete and much work is still required to fully understand their precise roles in the biological treatment process. Copyright © 2010 Elsevier Inc. All rights reserved.
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            Extracellular DNA required for bacterial biofilm formation.

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              Biofilms as complex differentiated communities.

              Prokaryotic biofilms that predominate in a diverse range of ecosystems are often composed of highly structured multispecies communities. Within these communities metabolic activities are integrated, and developmental sequences, not unlike those of multicellular organisms, can be detected. These structural adaptations and interrelationships are made possible by the expression of sets of genes that result in phenotypes that differ profoundly from those of planktonically grown cells of the same species. Molecular and microscopic evidence suggest the existence of a succession of de facto biofilm phenotypes. We submit that complex cell-cell interactions within prokaryotic communities are an ancient characteristic, the development of which was facilitated by the localization of cells at surfaces. In addition to spatial localization, surfaces may have provided the protective niche in which attached cells could create a localized homeostatic environment. In a holistic sense both biofilm and planktonic phenotypes may be viewed as integrated components of prokaryote life.
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                Author and article information

                Contributors
                boris.mizaikoff@uni-ulm.de
                Journal
                NPJ Biofilms Microbiomes
                NPJ Biofilms Microbiomes
                NPJ Biofilms and Microbiomes
                Nature Publishing Group UK (London )
                2055-5008
                19 November 2022
                19 November 2022
                2022
                : 8
                : 92
                Affiliations
                [1 ]GRID grid.6582.9, ISNI 0000 0004 1936 9748, Institute of Analytical and Bioanalytical Chemistry, , Ulm University, Albert Einstein-Allee 11, ; 89081 Ulm, Germany
                [2 ]GRID grid.410712.1, ISNI 0000 0004 0473 882X, Institute of Pharmacology and Toxicology, Ulm University Medical Center, Albert Einstein-Allee 11, ; 89081 Ulm, Germany
                [3 ]GRID grid.419120.f, ISNI 0000 0004 0388 6652, Dairy Research Institute (IPLA-CSIC), ; Paseo Rio Linares s/n, 33300 Villaviciosa, Spain
                [4 ]GRID grid.7644.1, ISNI 0000 0001 0120 3326, Chemistry Department, University of Bari ‘’Aldo Moro”, ; V. Orabona, 4, 70126 Bari, Italy
                Author information
                http://orcid.org/0000-0001-5424-5175
                http://orcid.org/0000-0002-7613-3745
                http://orcid.org/0000-0002-8832-2770
                http://orcid.org/0000-0002-5583-7962
                Article
                353
                10.1038/s41522-022-00353-5
                9675856
                36402858
                88d73172-3234-4592-870c-12f64c878aac
                © The Author(s) 2022

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 29 January 2022
                : 26 October 2022
                Categories
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                © The Author(s) 2022

                biofilms,antimicrobials
                biofilms, antimicrobials

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