39
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      A low-cost affinity purification system using β-1,3-glucan recognition protein and curdlan beads

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Silkworm β-1,3-glucan recognition protein (βGRP) tightly and specifically associates with β-1,3-glucan . We report here an affinity purification system named the ‘GRP system’, which uses the association between the β-1,3-glucan recognition domain of βGRP (GRP-tag), as an affinity tag, and curdlan beads. Curdlan is a water-insoluble β-1,3-glucan reagent, the low cost of which (about 100 JPY/g) allows the economical preparation of beads. Curdlan beads can be readily prepared by solubilization in an alkaline solution, followed by neutralization, sonication and centrifugation. We applied the GRP system to preparation of several proteins and revealed that the expression levels of the GRP-tagged proteins in soluble fractions were two or three times higher than those of the glutathione S-transferase (GST)-tagged proteins. The purity of the GRP-tagged proteins on the curdlan beads was comparable to that of the GST-tagged proteins on glutathione beads. The chemical stability of the GRP system was more robust than conventional affinity systems under various conditions, including low pH (4–6). Biochemical and structural analyses revealed that proteins produced using the GRP system were structurally and functionally active. Thus, the GRP system is suitable for both the large- and small-scale preparation of recombinant proteins for functional and structural analyses.

          Related collections

          Most cited references23

          • Record: found
          • Abstract: found
          • Article: not found

          Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase.

          Plasmid expression vectors have been constructed that direct the synthesis of foreign polypeptides in Escherichia coli as fusions with the C terminus of Sj26, a 26-kDa glutathione S-transferase (GST; EC 2.5.1.18) encoded by the parasitic helminth Schistosoma japonicum. In the majority of cases, fusion proteins are soluble in aqueous solutions and can be purified from crude bacterial lysates under non-denaturing conditions by affinity chromatography on immobilised glutathione. Using batch wash procedures several fusion proteins can be purified in parallel in under 2 h with yields of up to 15 micrograms protein/ml of culture. The vectors have been engineered so that the GST carrier can be cleaved from fusion proteins by digestion with site-specific proteases such as thrombin or blood coagulation factor Xa, following which, the carrier and any uncleaved fusion protein can be removed by absorption on glutathione-agarose. This system has been used successfully for the expression and purification of more than 30 different eukaryotic polypeptides.
            Bookmark
            • Record: found
            • Abstract: not found
            • Article: not found

            Metal chelate affinity chromatography, a new approach to protein fractionation.

              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Nonself RNA-sensing mechanism of RIG-I helicase and activation of antiviral immune responses.

              A DExD/H protein, RIG-I, is critical in innate antiviral responses by sensing viral RNA. Here we show that RIG-I recognizes two distinct viral RNA patterns: double-stranded (ds) and 5'ppp single-stranded (ss) RNA. The binding of RIG-I with dsRNA or 5'ppp ssRNA in the presence of ATP produces a common structure, as suggested by protease digestion. Further analyses demonstrated that the C-terminal domain of RIG-I (CTD) recognizes these RNA patterns and CTD coincides with the autorepression domain. Structural analysis of CTD by NMR spectroscopy in conjunction with mutagenesis revealed that the basic surface of CTD with a characteristic cleft interacts with RIG-I ligands. Our results suggest that the bipartite structure of CTD regulates RIG-I on encountering viral RNA patterns.
                Bookmark

                Author and article information

                Journal
                Protein Eng Des Sel
                Protein Eng. Des. Sel
                proeng
                proeng
                Protein Engineering, Design and Selection
                Oxford University Press
                1741-0126
                1741-0134
                August 2012
                15 June 2012
                15 June 2012
                : 25
                : 8
                : 405-413
                Affiliations
                [1 ]Laboratory of Biomolecular Science, Graduate School of Pharmaceutical Sciences, simpleHokkaido University , N-12, W-6, Kita-ku, Sapporo 060-0812, Japan
                [2 ]Laboratory of Molecular Genetics, simpleInstitute for Virus Research , simpleKyoto University , Kyoto 606-8507, Japan
                [3 ]Department of Structural Biology, Faculty of Advanced Life Science, simpleHokkaido University , N-21, W-11, Kita-ku, Sapporo 001-0021, Japan
                [4 ]Institute of Low Temperature Science, simpleHokkaido University , N-19, W-8, Kita-ku, Sapporo 060-0819, Japan
                Author notes
                [5 ]To whom correspondence should be addressed. E-mail: finagaki@ 123456pharm.hokudai.ac.jp

                Edited by Anthony Wilkinson

                Article
                gzs028
                10.1093/protein/gzs028
                3390167
                22706764
                85024124-6959-4c4b-b8a0-f7530a8ea418
                Published by Oxford University Press 2012

                This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License ( http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 8 December 2011
                : 8 May 2012
                : 9 May 2012
                Page count
                Pages: 9
                Categories
                Original Articles

                Biomedical engineering
                curdlan,recombinant protein,β-1,3-glucan recognition protein,affinity tag,glutathione s-transferase

                Comments

                Comment on this article