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      Molecular and Functional Characterization of Novel Fructosyltransferases and Invertases from Agave tequilana

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          Abstract

          Fructans are the main storage polysaccharides found in Agave species. The synthesis of these complex carbohydrates relies on the activities of specific fructosyltransferase enzymes closely related to the hydrolytic invertases. Analysis of Agave tequilana transcriptome data led to the identification of ESTs encoding putative fructosyltransferases and invertases. Based on sequence alignments and structure/function relationships, two different genes were predicted to encode 1-SST and 6G-FFT type fructosyltransferases, in addition, 4 genes encoding putative cell wall invertases and 4 genes encoding putative vacuolar invertases were also identified. Probable functions for each gene, were assigned based on conserved amino acid sequences and confirmed for 2 fructosyltransferases and one invertase by analyzing the enzymatic activity of recombinant Agave protein s expressed and purified from Pichia pastoris. The genome organization of the fructosyltransferase/invertase genes, for which the corresponding cDNA contained the complete open reading frame, was found to be well conserved since all genes were shown to carry a 9 bp mini-exon and all showed a similar structure of 8 exons/7 introns with the exception of a cell wall invertase gene which has 7 exons and 6 introns. Fructosyltransferase genes were strongly expressed in the storage organs of the plants, especially in vegetative stages of development and to lower levels in photosynthetic tissues, in contrast to the invertase genes where higher levels of expression were observed in leaf tissues and in mature plants.

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          Most cited references59

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          Multiple sequence alignment with the Clustal series of programs.

          R Chenna (2003)
          The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees. The popularity of the programs depends on a number of factors, including not only the accuracy of the results, but also the robustness, portability and user-friendliness of the programs. New features include NEXUS and FASTA format output, printing range numbers and faster tree calculation. Although, Clustal was originally developed to run on a local computer, numerous Web servers have been set up, notably at the EBI (European Bioinformatics Institute) (http://www.ebi.ac.uk/clustalw/).
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            Invertases. Primary structures, functions, and roles in plant development and sucrose partitioning.

            Arnd Sturm (1999)
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              Fructan: more than a reserve carbohydrate?

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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, USA )
                1932-6203
                2012
                30 April 2012
                : 7
                : 4
                : e35878
                Affiliations
                [1 ]Department of Plant Genetic Engineering, Cinvestav-Irapuato, Irapuato, Guanajuato, Mexico
                [2 ]Colegio de Postgraduados Campus Campeche, Sihochac, Champotón, Campeche, Mexico
                [3 ]Department of Biotechnology and Biochemistry, Cinvestav-Irapuato, Irapuato, Guanajuato, Mexico
                Griffith University, Australia
                Author notes

                Conceived and designed the experiments: CCR JS AMH. Performed the experiments: CCR EMM MGL AMH. Analyzed the data: CCR AMH JS MGL EMM. Contributed reagents/materials/analysis tools: JS MGL AMH. Wrote the paper: CCR JS.

                Article
                PONE-D-12-02488
                10.1371/journal.pone.0035878
                3340406
                22558253
                77976854-a2e7-49be-84c6-938ce1fc5b1e
                Cortés-Romero et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
                History
                : 25 January 2012
                : 23 March 2012
                Page count
                Pages: 13
                Categories
                Research Article
                Agriculture
                Agricultural Biotechnology
                Crops
                Raw Materials
                Biology
                Biochemistry
                Plant Biochemistry
                Carbohydrate Biosynthesis
                Proteins
                Recombinant Proteins
                Computational Biology
                Genomics
                Genome Analysis Tools
                Transcriptomes
                Genetics
                Gene Expression
                DNA transcription
                Molecular Genetics
                Gene Identification and Analysis
                Gene Function
                Plant Genetics

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                Uncategorized

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