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      The fission yeast MTREC and EJC orthologs ensure the maturation of meiotic transcripts during meiosis

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          Abstract

          Meiosis is a highly regulated process by which genetic information is transmitted through sexual reproduction. It encompasses unique mechanisms that do not occur in vegetative cells, producing a distinct, well-regulated meiotic transcriptome. During vegetative growth, many meiotic genes are constitutively transcribed, but most of the resulting mRNAs are rapidly eliminated by the Mmi1-MTREC (Mtl1-Red1 core) complex. While Mmi1-MTREC targets premature meiotic RNAs for degradation by the nuclear 3′–5′ exoribonuclease exosome during mitotic growth, its role in meiotic gene expression during meiosis is not known. Here, we report that Red5, an essential MTREC component, interacts with pFal1, an ortholog of eukaryotic translation initiation factor eIF4aIII in the fission yeast Schizosaccharomyces pombe. In mammals, together with MAGO (Mnh1), Rnps1, and Y14, elF4AIII (pFal1) forms the core of the exon junction complex (EJC), which is essential for transcriptional surveillance and localization of mature mRNAs. In fission yeast, two EJC orthologs, pFal1 and Mnh1, are functionally connected with MTREC, specifically in the process of meiotic gene expression during meiosis. Although pFal1 interacts with Mnh1, Y14, and Rnps1, its association with Mnh1 is not disrupted upon loss of Y14 or Rnps1. Mutations of Red1, Red5, pFal1, or Mnh1 produce severe meiotic defects; the abundance of meiotic transcripts during meiosis decreases; and mRNA maturation processes such as splicing are impaired. Since studying meiosis in mammalian germline cells is difficult, our findings in fission yeast may help to define the general mechanisms involved in accurate meiotic gene expression in higher eukaryotes.

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          Most cited references62

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          The DEAD-box protein family of RNA helicases.

          RNA helicases of the DEAD-box protein family have been shown to participate in every aspect of RNA metabolism. They are present in most organisms where they work as RNA helicases or RNPases. The properties of these enzymes in vivo remains poorly described, however some were extensively characterized in vitro, and the solved crystal structures of a few are now available. Taken together, this information gives insight into the regulation of ATP and RNA binding as well as in the ATPase and helicase activities. This review will focus on the description of the molecular characteristics of members of the DEAD-box protein family and on the enzymatic activities they possess.
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            Comparative functional genomics of the fission yeasts.

            The fission yeast clade--comprising Schizosaccharomyces pombe, S. octosporus, S. cryophilus, and S. japonicus--occupies the basal branch of Ascomycete fungi and is an important model of eukaryote biology. A comparative annotation of these genomes identified a near extinction of transposons and the associated innovation of transposon-free centromeres. Expression analysis established that meiotic genes are subject to antisense transcription during vegetative growth, which suggests a mechanism for their tight regulation. In addition, trans-acting regulators control new genes within the context of expanded functional modules for meiosis and stress response. Differences in gene content and regulation also explain why, unlike the budding yeast of Saccharomycotina, fission yeasts cannot use ethanol as a primary carbon source. These analyses elucidate the genome structure and gene regulation of fission yeast and provide tools for investigation across the Schizosaccharomyces clade.
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              Cancer/testis antigens, gametogenesis and cancer.

              Cancer/testis (CT) antigens, of which more than 40 have now been identified, are encoded by genes that are normally expressed only in the human germ line, but are also expressed in various tumour types, including melanoma, and carcinomas of the bladder, lung and liver. These immunogenic proteins are being vigorously pursued as targets for therapeutic cancer vaccines. CT antigens are also being evaluated for their role in oncogenesis--recapitulation of portions of the germline gene-expression programme might contribute characteristic features to the neoplastic phenotype, including immortality, invasiveness, immune evasion, hypomethylation and metastatic capacity.
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                Author and article information

                Journal
                RNA
                RNA
                RNA
                RNA
                Cold Spring Harbor Laboratory Press
                1355-8382
                1469-9001
                September 2016
                September 2016
                : 22
                : 9
                : 1349-1359
                Affiliations
                [1 ]Department of Biology and Center for Molecular Communication and Signaling, Wake Forest University, Winston-Salem, North Carolina 27106, USA
                [2 ]Program of Human Genetics, Johns Hopkins School of Medicine, Baltimore, Maryland 21205, USA
                Author notes
                [3]

                These authors contributed equally to this work.

                Corresponding author: zhangk@ 123456wfu.edu
                Article
                9509184 RA
                10.1261/rna.055608.115
                4986891
                27365210
                773c0383-656b-463c-a77f-bf2a66ffcba1
                © 2016 Marayati et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society

                This article, published in RNA, is available under a Creative Commons License (Attribution 4.0 International), as described at http://creativecommons.org/licenses/by/4.0/.

                History
                : 7 December 2015
                : 21 May 2016
                Funding
                Funded by: National Institutes of Health http://dx.doi.org/10.13039/100000002
                Funded by: National Cancer Institute http://dx.doi.org/10.13039/100000054
                Award ID: RG1200
                Funded by: Wake Forest University http://dx.doi.org/10.13039/100007154
                Award ID: U01737
                Funded by: Wake Forest University http://dx.doi.org/10.13039/100007154
                Award ID: D00641
                Funded by: Wake Forest University http://dx.doi.org/10.13039/100007154
                Award ID: U01740
                Categories
                Article

                mtrec,elf4aiii,mago,meiosis,splicing,exon junction complex
                mtrec, elf4aiii, mago, meiosis, splicing, exon junction complex

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