17
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Hallmarks of neurodegenerative disease: A systems pharmacology perspective

      review-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Age‐related central neurodegenerative diseases, such as Alzheimer's and Parkinson's disease, are a rising public health concern and have been plagued by repeated drug development failures. The complex nature and poor mechanistic understanding of the etiology of neurodegenerative diseases has hindered the discovery and development of effective disease‐modifying therapeutics. Quantitative systems pharmacology models of neurodegeneration diseases may be useful tools to enhance the understanding of pharmacological intervention strategies and to reduce drug attrition rates. Due to the similarities in pathophysiological mechanisms across neurodegenerative diseases, especially at the cellular and molecular levels, we envision the possibility of structural components that are conserved across models of neurodegenerative diseases. Conserved structural submodels can be viewed as building blocks that are pieced together alongside unique disease components to construct quantitative systems pharmacology (QSP) models of neurodegenerative diseases. Model parameterization would likely be different between the different types of neurodegenerative diseases as well as individual patients. Formulating our mechanistic understanding of neurodegenerative pathophysiology as a mathematical model could aid in the identification and prioritization of drug targets and combinatorial treatment strategies, evaluate the role of patient characteristics on disease progression and therapeutic response, and serve as a central repository of knowledge. Here, we provide a background on neurodegenerative diseases, highlight hallmarks of neurodegeneration, and summarize previous QSP models of neurodegenerative diseases.

          Related collections

          Most cited references215

          • Record: found
          • Abstract: found
          • Article: not found

          Neuropathological stageing of Alzheimer-related changes

          Eighty-three brains obtained at autopsy from nondemented and demented individuals were examined for extracellular amyloid deposits and intraneuronal neurofibrillary changes. The distribution pattern and packing density of amyloid deposits turned out to be of limited significance for differentiation of neuropathological stages. Neurofibrillary changes occurred in the form of neuritic plaques, neurofibrillary tangles and neuropil threads. The distribution of neuritic plaques varied widely not only within architectonic units but also from one individual to another. Neurofibrillary tangles and neuropil threads, in contrast, exhibited a characteristic distribution pattern permitting the differentiation of six stages. The first two stages were characterized by an either mild or severe alteration of the transentorhinal layer Pre-alpha (transentorhinal stages I-II). The two forms of limbic stages (stages III-IV) were marked by a conspicuous affection of layer Pre-alpha in both transentorhinal region and proper entorhinal cortex. In addition, there was mild involvement of the first Ammon's horn sector. The hallmark of the two isocortical stages (stages V-VI) was the destruction of virtually all isocortical association areas. The investigation showed that recognition of the six stages required qualitative evaluation of only a few key preparations.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease.

            Alzheimer's disease (AD) is a detrimental neurodegenerative disease with no effective treatments. Due to cellular heterogeneity, defining the roles of immune cell subsets in AD onset and progression has been challenging. Using transcriptional single-cell sorting, we comprehensively map all immune populations in wild-type and AD-transgenic (Tg-AD) mouse brains. We describe a novel microglia type associated with neurodegenerative diseases (DAM) and identify markers, spatial localization, and pathways associated with these cells. Immunohistochemical staining of mice and human brain slices shows DAM with intracellular/phagocytic Aβ particles. Single-cell analysis of DAM in Tg-AD and triggering receptor expressed on myeloid cells 2 (Trem2)(-/-) Tg-AD reveals that the DAM program is activated in a two-step process. Activation is initiated in a Trem2-independent manner that involves downregulation of microglia checkpoints, followed by activation of a Trem2-dependent program. This unique microglia-type has the potential to restrict neurodegeneration, which may have important implications for future treatment of AD and other neurodegenerative diseases. VIDEO ABSTRACT.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1.

              Autophagy is a process by which components of the cell are degraded to maintain essential activity and viability in response to nutrient limitation. Extensive genetic studies have shown that the yeast ATG1 kinase has an essential role in autophagy induction. Furthermore, autophagy is promoted by AMP activated protein kinase (AMPK), which is a key energy sensor and regulates cellular metabolism to maintain energy homeostasis. Conversely, autophagy is inhibited by the mammalian target of rapamycin (mTOR), a central cell-growth regulator that integrates growth factor and nutrient signals. Here we demonstrate a molecular mechanism for regulation of the mammalian autophagy-initiating kinase Ulk1, a homologue of yeast ATG1. Under glucose starvation, AMPK promotes autophagy by directly activating Ulk1 through phosphorylation of Ser 317 and Ser 777. Under nutrient sufficiency, high mTOR activity prevents Ulk1 activation by phosphorylating Ulk1 Ser 757 and disrupting the interaction between Ulk1 and AMPK. This coordinated phosphorylation is important for Ulk1 in autophagy induction. Our study has revealed a signalling mechanism for Ulk1 regulation and autophagy induction in response to nutrient signalling.
                Bookmark

                Author and article information

                Contributors
                peterbloomingdale@gmail.com
                Journal
                CPT Pharmacometrics Syst Pharmacol
                CPT Pharmacometrics Syst Pharmacol
                10.1002/(ISSN)2163-8306
                PSP4
                CPT: Pharmacometrics & Systems Pharmacology
                John Wiley and Sons Inc. (Hoboken )
                2163-8306
                17 August 2022
                November 2022
                : 11
                : 11 ( doiID: 10.1002/psp4.v11.11 )
                : 1399-1429
                Affiliations
                [ 1 ] Quantitative Pharmacology and Pharmacometrics Merck & Co., Inc. Boston Massachusetts USA
                [ 2 ] InSysBio Moscow Russia
                [ 3 ] Clinical Pharmacology Genentech, Inc. South San Francisco California USA
                [ 4 ] Certara QSP Oss The Netherlands
                [ 5 ] Certara QSP Princeton New Jersey USA
                [ 6 ] Faculté de Pharmacie University of Montreal Montreal Quebec Canada
                [ 7 ] Shionogi & Co., Ltd. Osaka Japan
                [ 8 ] SUNY Downstate Medical Center New York New York USA
                [ 9 ] Neuroscience, Biopharmaceuticals R&D AstraZeneca Cambridge UK
                [ 10 ] Vantage Research Chennai Tamil Nadu India
                [ 11 ] Amgen South San Francisco California USA
                [ 12 ] Clinical Pharmacology and Pharmacometrics Biogen Cambridge Massachusetts USA
                [ 13 ] Eisai Nutley New Jersey USA
                [ 14 ] Center for Neural Engineering Department of Biomedical Engineering at the Viterbi School of Engineering Los Angeles California USA
                [ 15 ] Institute for Technology and Medical Systems Innovation, Keck School of Medicine University of Southern California Los Angeles California USA
                Author notes
                [*] [* ] Correspondence

                Peter Bloomingdale, Quantitative Pharmacology and Pharmacometrics, Merck & Co., Inc., 33 Avenue Louis Pasteur, Boston, MA 02115, USA.

                Email: peterbloomingdale@ 123456gmail.com

                Author information
                https://orcid.org/0000-0003-2860-6488
                https://orcid.org/0000-0002-7767-1705
                https://orcid.org/0000-0003-1606-1740
                https://orcid.org/0000-0002-9736-1800
                Article
                PSP412852 PSP-2022-0082C
                10.1002/psp4.12852
                9662204
                35894182
                73600100-3460-4524-aecd-7308e51df169
                © 2022 The Authors. CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

                History
                : 17 July 2022
                : 20 April 2022
                : 19 July 2022
                Page count
                Figures: 6, Tables: 1, Pages: 31, Words: 17706
                Categories
                White Paper
                White Paper
                White Paper
                Custom metadata
                2.0
                November 2022
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.2.1 mode:remove_FC converted:14.11.2022

                Comments

                Comment on this article