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      No skin off your back: the sampling and extraction of sebum for metabolomics

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          Abstract

          Introduction

          Sebum-based metabolomics (a subset of “sebomics”) is a developing field that involves the sampling, identification, and quantification of metabolites found in human sebum. Sebum is a lipid-rich oily substance secreted by the sebaceous glands onto the skin surface for skin homeostasis, lubrication, thermoregulation, and environmental protection. Interest in sebomics has grown over the last decade due to its potential for rapid analysis following non-invasive sampling for a range of clinical and environmental applications.

          Objectives

          To provide an overview of various sebum sampling techniques with their associated challenges.

          To evaluate applications of sebum for clinical research, drug monitoring, and human biomonitoring.

          To provide a commentary of the opportunities of using sebum as a diagnostic biofluid in the future.

          Methods

          Bibliometric analyses of selected keywords regarding skin surface analysis using the Scopus search engine from 1960 to 2022 was performed on 12th January 2023. The published literature was compartmentalised based on what the work contributed to in the following areas: the understanding about sebum, its composition, the analytical technologies used, or the purpose of use of sebum. The findings were summarised in this review.

          Results

          Historically, about 15 methods of sampling have been used for sebum collection. The sample preparation approaches vary depending on the analytes of interest and are summarised. The use of sebum is not limited to just skin diseases or drug monitoring but also demonstrated for other systemic disease. Most of the work carried out for untargeted analysis of metabolites associated with sebum has been in the recent two decades.

          Conclusion

          Sebum has a huge potential beyond skin research and understanding how one’s physiological state affects or reflects on the skin metabolome via the sebaceous glands itself or by interactions with sebaceous secretion, will open doors for simpler biomonitoring. Sebum acts as a sink to environmental metabolites and has applications awaiting to be explored, such as biosecurity, cross-border migration, localised exposure to harmful substances, and high-throughput population screening. These applications will be possible with rapid advances in volatile headspace and lipidomics method development as well as the ability of the metabolomics community to annotate unknown species better. A key issue with skin surface analysis that remains unsolved is attributing the source of the metabolites found on the skin surface before meaningful biological interpretation.

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          Most cited references196

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          A SIMPLE METHOD FOR THE ISOLATION AND PURIFICATION OF TOTAL LIPIDES FROM ANIMAL TISSUES

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            A RAPID METHOD OF TOTAL LIPID EXTRACTION AND PURIFICATION

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              Lipid extraction by methyl-tert-butyl ether for high-throughput lipidomics.

              Accurate profiling of lipidomes relies upon the quantitative and unbiased recovery of lipid species from analyzed cells, fluids, or tissues and is usually achieved by two-phase extraction with chloroform. We demonstrated that methyl-tert-butyl ether (MTBE) extraction allows faster and cleaner lipid recovery and is well suited for automated shotgun profiling. Because of MTBE's low density, lipid-containing organic phase forms the upper layer during phase separation, which simplifies its collection and minimizes dripping losses. Nonextractable matrix forms a dense pellet at the bottom of the extraction tube and is easily removed by centrifugation. Rigorous testing demonstrated that the MTBE protocol delivers similar or better recoveries of species of most all major lipid classes compared with the "gold-standard" Folch or Bligh and Dyer recipes.
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                Author and article information

                Contributors
                drupad.trivedi@manchester.ac.uk
                Journal
                Metabolomics
                Metabolomics
                Metabolomics
                Springer US (New York )
                1573-3882
                1573-3890
                24 March 2023
                24 March 2023
                2023
                : 19
                : 4
                : 21
                Affiliations
                [1 ]GRID grid.5379.8, ISNI 0000000121662407, School of Chemistry, Manchester Institute of Biotechnology, , University of Manchester, ; Princess Street, Manchester, M1 7DN UK
                [2 ]GRID grid.451052.7, ISNI 0000 0004 0581 2008, Department of Respiratory Medicine, , Manchester University Hospitals NHS Foundation Trust, ; Manchester, UK
                [3 ]GRID grid.5379.8, ISNI 0000000121662407, Faculty of Biology, Medicine and Health, School of Biological Sciences, , University of Manchester, ; Manchester, UK
                [4 ]GRID grid.451052.7, ISNI 0000 0004 0581 2008, NIHR Manchester Biomedical Research Centre, , Manchester University Hospitals NHS Foundation Trust, ; Manchester, UK
                Article
                1982
                10.1007/s11306-023-01982-3
                10038389
                36964290
                6be1bf67-d13a-4449-8bbd-e4dc14ca63bb
                © The Author(s) 2023

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 22 July 2022
                : 19 February 2023
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100000268, Biotechnology and Biological Sciences Research Council;
                Funded by: MRC
                Categories
                Review Article
                Custom metadata
                © Springer Science+Business Media, LLC, part of Springer Nature 2023

                Molecular biology
                sebum,biomarkers,sebum extraction,sebum enrichment,metabolomics,lipidomics
                Molecular biology
                sebum, biomarkers, sebum extraction, sebum enrichment, metabolomics, lipidomics

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