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      Occurrence of the amphibians in the Volga, Don River basins and adjacent territories (Russia): research in 1996-2020

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          Abstract

          Background

          Knowledge about the distribution of living organisms on Earth is very important for many areas of biological science and understanding of the surrounding world. However, much of the existing distributional data are scattered throughout a multitude of sources, such as taxonomic publications, checklists and natural history collections and often, bringing them together is difficult. A very successful attempt to solve this problem is the GBIF project, which allows a huge number of researchers to publish data in one place in a single standard. Our dataset represents a significant addition to the occurrences of amphibians in the Volga, Don riverine basins and adjacent territories.

          The dataset contains up-to-date information on amphibian occurrences in the Volga river basin and adjacent territories, located for the most part on the Russian plain of European Russia. The dataset is based on our own studies that were conducted in the years 1996-2020. The dataset consists of 5,030 incident records, all linked to geographical coordinates. A total of 13 amphibian species belonging to nine genera and six families have been registered within the studied territory, although the distribution of amphibian species in this region of Russia has not yet been fully studied. This is especially relevant with the spread of cryptic species that can only be identified using molecular genetic research methods.

          The main purpose of publishing a database is to make our data available in the global biodiversity system to a wide range of users. The data can be used by researchers, as well as helping the authorities to manage their territory more efficiently.

          New information

          All occurrences are published in GBIF for the first time. Most of the data are stored in field diaries and we would like to make it available to everyone by adding it in the global biodiversity database (GBIF).

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          Most cited references30

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          Amphibian Breeding and Climate Change

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            The potential effects of climate change on amphibian distribution, range fragmentation and turnover in China

            Many studies predict that climate change will cause species movement and turnover, but few have considered the effect of climate change on range fragmentation for current species and/or populations. We used MaxEnt to predict suitable habitat, fragmentation and turnover for 134 amphibian species in China under 40 future climate change scenarios spanning four pathways (RCP2.6, RCP4.5, RCP6 and RCP8.5) and two time periods (the 2050s and 2070s). Our results show that climate change may cause a major shift in spatial patterns of amphibian diversity. Amphibians in China would lose 20% of their original ranges on average; the distribution outside current ranges would increase by 15%. Suitable habitats for over 90% of species will be located in the north of their current range, for over 95% of species in higher altitudes (from currently 137–4,124 m to 286–4,396 m in the 2050s or 314–4,448 m in the 2070s), and for over 75% of species in the west of their current range. Also, our results predict two different general responses to the climate change: some species contract their ranges while moving westwards, southwards and to higher altitudes, while others expand their ranges. Finally, our analyses indicate that range dynamics and fragmentation are related, which means that the effects of climate change on Chinese amphibians might be two-folded.
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              Strategies and guidelines for scholarly publishing of biodiversity data

              The present paper describes policies and guidelines for scholarly publishing of biodiversity and biodiversity-related data, elaborated and updated during the Framework Program 7 EU BON project, on the basis of an earlier version published on Pensoft's website in 2011. The document discusses some general concepts, including a definition of datasets, incentives to publish data and licenses for data publishing. Further, it defines and compares several routes for data publishing, namely as (1) supplementary files to research articles, which may be made available directly by the publisher, or (2) published in a specialized open data repository with a link to it from the research article, or (3) as a data paper, i.e., a specific, stand-alone publication describing a particular dataset or a collection of datasets, or (4) integrated narrative and data publishing through online import/download of data into/from manuscripts, as provided by the Biodiversity Data Journal. The paper also contains detailed instructions on how to prepare and peer review data intended for publication, listed under the Guidelines for Authors and Reviewers, respectively. Special attention is given to existing standards, protocols and tools to facilitate data publishing, such as the Integrated Publishing Toolkit of the Global Biodiversity Information Facility (GBIF IPT) and the DarwinCore Archive (DwC-A). A separate section describes most leading data hosting/indexing infrastructures and repositories for biodiversity and ecological data.
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                Author and article information

                Contributors
                Journal
                Biodivers Data J
                Biodivers Data J
                1
                urn:lsid:arphahub.com:pub:F9B2E808-C883-5F47-B276-6D62129E4FF4
                urn:lsid:zoobank.org:pub:245B00E9-BFE5-4B4F-B76E-15C30BA74C02
                Biodiversity Data Journal
                Pensoft Publishers
                1314-2836
                1314-2828
                2020
                29 December 2020
                : 8
                : e61378
                Affiliations
                [1 ] Joint Directorate of the Mordovia State Nature Reserve and National Park "Smolny", Saransk, Russia Joint Directorate of the Mordovia State Nature Reserve and National Park "Smolny" Saransk Russia
                [2 ] Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Russia Papanin Institute for Biology of Inland Waters Russian Academy of Sciences Borok Russia
                [3 ] Municipal budgetary institution of the additional education "Station of young naturalists" in Sarov, Sarov, Russia Municipal budgetary institution of the additional education "Station of young naturalists" in Sarov Sarov Russia
                [4 ] Penza State University, Penza, Russia Penza State University Penza Russia
                [5 ] Kazan Federal University, Kazan, Russia Kazan Federal University Kazan Russia
                [6 ] Federal Hygienic and Epidemiological Center in Kaluga Region of Rospotrebnadzor, Kaluga, Russia Federal Hygienic and Epidemiological Center in Kaluga Region of Rospotrebnadzor Kaluga Russia
                [7 ] A.N. Severtsov Institute of Ecology and Evolution of RAS, Moscow, Russia A.N. Severtsov Institute of Ecology and Evolution of RAS Moscow Russia
                [8 ] Volzhsko-Kamsky National Nature Biosphere Rezerve, Sadoviy, Russia Volzhsko-Kamsky National Nature Biosphere Rezerve Sadoviy Russia
                [9 ] Mari State University, Yoshkar-Ola, Russia Mari State University Yoshkar-Ola Russia
                [10 ] A.N. Severtsov Institute of Ecology and Evolution of RAS, Saratov, Russia A.N. Severtsov Institute of Ecology and Evolution of RAS Saratov Russia
                [11 ] Samara Federal Research Center of Russian Academy of Sciences, Institute of Ecology of the Volga River basin of RAS, Togliatti, Russia Samara Federal Research Center of Russian Academy of Sciences, Institute of Ecology of the Volga River basin of RAS Togliatti Russia
                [12 ] Perm State Humanitarian Pedagogical University, Perm, Russia Perm State Humanitarian Pedagogical University Perm Russia
                [13 ] Central Chernozem Nature Reserve, Zapovednyi, Russia Central Chernozem Nature Reserve Zapovednyi Russia
                Author notes
                Corresponding author: Alexander Ruchin ( ruchin.alexander@ 123456gmail.com ).

                Academic editor: Dmitry Schigel

                Author information
                https://orcid.org/0000-0002-2927-406X
                https://orcid.org/0000-0002-8400-6826
                Article
                61378 15158
                10.3897/BDJ.8.e61378
                7785717
                69c546ce-9533-4c62-95e1-125bb353791a
                Alexander Ruchin, Oleg Artaev, Elvira Sharapova, Oleg Ermakov, Renat Zamaletdinov, Vjacheslav Korzikov, Ivan Bashinsky, Alexey Pavlov, Anton O Svinin, Alexander Ivanov, Vasily Tabachishin, Anastasiya Klenina, Svetlana Ganshchuk, Nikolai Litvinov, Nikolai Chetanov, Andrei Vlasov, Olga Vlasova

                This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 26 November 2020
                : 22 December 2020
                Page count
                Figures: 1, Tables: 1, References: 28
                Funding
                The study was supported by grants of Russian Foundation for Basic Research (project 18–04-00640).
                Categories
                Data Paper (Biosciences)
                West of Urals 2020
                Amphibia
                Zoology & Animal Biology
                Eastern Europe

                dataset,amphibians occurrences, amphibia ,data paper
                dataset, amphibians occurrences, amphibia , data paper

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