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      IGF2BP3 is an essential N 6-methyladenosine biotarget for suppressing ferroptosis in lung adenocarcinoma cells

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      a , b , 1 , c , 1 , d , 1 , a , b , b , a , a , b , b , b , e , b , f , , a , b , g , ∗∗ , d , ∗∗∗
      Materials Today Bio
      Elsevier
      m6A RNA methylation, m6A reader, Ferroptosis, Therapeutic target, Lung adenocarcinoma, LUAD, lung adenocarcinoma, m6A, N6-methyladenosine, IGF2BP3, insulin-like growth factor 2 mRNA binding protein 3, GPX4, glutathione peroxidase 4, SLC3A2, solute carrier family 3 member 2, ACSL3, acyl-CoA synthetase long chain family member 3, FTH1, ferritin heavy chain 1, PKM, pyruvate kinase M1/2, ROS, reactive oxygen species, METTL3, methyltransferase-like 3, FTO, fat mass-and obesity-associated gene, YTHDF2, YTH domain family 2, qRT-PCR, quantitative reverse transcription PCR, IB, immunoblotting, IHC, immunohistochemistry, ELISA, enzyme-linked immunosorbent assay, TMA, tissue microarray assay, METTL14, methyltransferase-like 14, WTAP, Wilms' tumor 1-associating protein, ALKBH5, alkB homolog 5, VIRMA, vir-like m6A methyltransferase associated, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, ZC3H13, zinc finger CCCH-type containing 13, RBM15, RNA binding motif protein 15, MDA, malondialdehyde

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          Abstract

          A lack of promising targets leads to poor prognosis in patients with lung adenocarcinoma (LUAD). Therefore, it is urgent to identify novel therapeutic targets. The importance of the N 6-methyladenosine (m 6A) RNA modification has been demonstrated in various types of tumors; however, knowledge of m 6A-related proteins in LUAD is still limited. Here, we found that insulin-like growth factor 2 mRNA binding protein 3 (IGF2BP3), an m 6A reader protein, is highly expressed in LUAD and associated with poor prognosis. IGF2BP3 desensitizes ferroptosis (a new form of regulated cell death) in a manner dependent on its m 6A reading domain and binding capacity to m 6A-methylated mRNAs encoding anti-ferroptotic factors, including but not limited to glutathione peroxidase 4 (GPX4), solute carrier family 3 member 2 (SLC3A2), acyl-CoA synthetase long chain family member 3 (ACSL3), and ferritin heavy chain 1 (FTH1). After IGF2BP3 overexpression, expression levels and mRNA stabilities of these anti-ferroptotic factors were successfully sustained. Notably, significant correlations between SLC3A2, ACSL3, and IGF2BP3 were revealed in clinical LUAD specimens, further establishing the essential role of IGF2BP3 in desensitizing ferroptosis. Inducing ferroptosis has been gradually accepted as an alternative strategy to treat tumors. Thus, IGF2BP3 could be a potential target for the future development of new biomaterial-associated therapeutic anti-tumor drugs.

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          Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries

          This article provides an update on the global cancer burden using the GLOBOCAN 2020 estimates of cancer incidence and mortality produced by the International Agency for Research on Cancer. Worldwide, an estimated 19.3 million new cancer cases (18.1 million excluding nonmelanoma skin cancer) and almost 10.0 million cancer deaths (9.9 million excluding nonmelanoma skin cancer) occurred in 2020. Female breast cancer has surpassed lung cancer as the most commonly diagnosed cancer, with an estimated 2.3 million new cases (11.7%), followed by lung (11.4%), colorectal (10.0 %), prostate (7.3%), and stomach (5.6%) cancers. Lung cancer remained the leading cause of cancer death, with an estimated 1.8 million deaths (18%), followed by colorectal (9.4%), liver (8.3%), stomach (7.7%), and female breast (6.9%) cancers. Overall incidence was from 2-fold to 3-fold higher in transitioned versus transitioning countries for both sexes, whereas mortality varied <2-fold for men and little for women. Death rates for female breast and cervical cancers, however, were considerably higher in transitioning versus transitioned countries (15.0 vs 12.8 per 100,000 and 12.4 vs 5.2 per 100,000, respectively). The global cancer burden is expected to be 28.4 million cases in 2040, a 47% rise from 2020, with a larger increase in transitioning (64% to 95%) versus transitioned (32% to 56%) countries due to demographic changes, although this may be further exacerbated by increasing risk factors associated with globalization and a growing economy. Efforts to build a sustainable infrastructure for the dissemination of cancer prevention measures and provision of cancer care in transitioning countries is critical for global cancer control.
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            Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.

            DAVID bioinformatics resources consists of an integrated biological knowledgebase and analytic tools aimed at systematically extracting biological meaning from large gene/protein lists. This protocol explains how to use DAVID, a high-throughput and integrated data-mining environment, to analyze gene lists derived from high-throughput genomic experiments. The procedure first requires uploading a gene list containing any number of common gene identifiers followed by analysis using one or more text and pathway-mining tools such as gene functional classification, functional annotation chart or clustering and functional annotation table. By following this protocol, investigators are able to gain an in-depth understanding of the biological themes in lists of genes that are enriched in genome-scale studies.
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              Ferroptosis: an iron-dependent form of nonapoptotic cell death.

              Nonapoptotic forms of cell death may facilitate the selective elimination of some tumor cells or be activated in specific pathological states. The oncogenic RAS-selective lethal small molecule erastin triggers a unique iron-dependent form of nonapoptotic cell death that we term ferroptosis. Ferroptosis is dependent upon intracellular iron, but not other metals, and is morphologically, biochemically, and genetically distinct from apoptosis, necrosis, and autophagy. We identify the small molecule ferrostatin-1 as a potent inhibitor of ferroptosis in cancer cells and glutamate-induced cell death in organotypic rat brain slices, suggesting similarities between these two processes. Indeed, erastin, like glutamate, inhibits cystine uptake by the cystine/glutamate antiporter (system x(c)(-)), creating a void in the antioxidant defenses of the cell and ultimately leading to iron-dependent, oxidative death. Thus, activation of ferroptosis results in the nonapoptotic destruction of certain cancer cells, whereas inhibition of this process may protect organisms from neurodegeneration. Copyright © 2012 Elsevier Inc. All rights reserved.
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                Author and article information

                Contributors
                Journal
                Mater Today Bio
                Mater Today Bio
                Materials Today Bio
                Elsevier
                2590-0064
                24 November 2022
                15 December 2022
                24 November 2022
                : 17
                : 100503
                Affiliations
                [a ]Department of Clinical Laboratory, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, 200030, China
                [b ]Shanghai Institute of Thoracic Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, 200030, China
                [c ]Department of Thoracic Surgery, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, 200030, China
                [d ]School of Public Health, Shanghai Jiao Tong University School of Medicine, 200025, China
                [e ]Shanghai University of Traditional Chinese Medicine, 201203, China
                [f ]Shanghai Lung Cancer Center, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200030, PR China
                [g ]College of Medical Technology, Shanghai Jiao Tong University School of Medicine, 200025, China
                Author notes
                []Corresponding author. No. 241, West Huaihai Rd, Shanghai, 200030, China. yhxu@ 123456shchest.org
                [∗∗ ]Corresponding author. No. 241, West Huaihai Rd, Shanghai, 200030, China. karajan2@ 123456163.com Jiayi.wang@ 123456sjtu.edu.cn
                [∗∗∗ ]Corresponding author. No. 227, South Chongqing Rd, Shanghai, 200025, China. yongxia.qiao@ 123456shsmu.edu.cn
                [1]

                These authors contributed equally to this work.

                Article
                S2590-0064(22)00301-5 100503
                10.1016/j.mtbio.2022.100503
                9707255
                36457846
                68a751ba-4768-4275-9f9e-7c3cf8634854
                © 2022 The Authors

                This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

                History
                : 25 September 2022
                : 21 November 2022
                : 22 November 2022
                Categories
                Advanced Materials for Disease Diagnosis edited by Kun Qian; Lin Huang

                m6a rna methylation,m6a reader,ferroptosis,therapeutic target,lung adenocarcinoma,luad, lung adenocarcinoma,m6a, n6-methyladenosine,igf2bp3, insulin-like growth factor 2 mrna binding protein 3,gpx4, glutathione peroxidase 4,slc3a2, solute carrier family 3 member 2,acsl3, acyl-coa synthetase long chain family member 3,fth1, ferritin heavy chain 1,pkm, pyruvate kinase m1/2,ros, reactive oxygen species,mettl3, methyltransferase-like 3,fto, fat mass-and obesity-associated gene,ythdf2, yth domain family 2,qrt-pcr, quantitative reverse transcription pcr,ib, immunoblotting,ihc, immunohistochemistry,elisa, enzyme-linked immunosorbent assay,tma, tissue microarray assay,mettl14, methyltransferase-like 14,wtap, wilms' tumor 1-associating protein,alkbh5, alkb homolog 5,virma, vir-like m6a methyltransferase associated,hnrnpa2b1, heterogeneous nuclear ribonucleoprotein a2/b1,zc3h13, zinc finger ccch-type containing 13,rbm15, rna binding motif protein 15,mda, malondialdehyde

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