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      Paracapillaria ( Ophidiocapillaria) siamensis sp. nov. (Nematoda: Trichuroidea): a new nematode in Naja kaouthia from Thailand

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          Abstract

          Abstract

          A comprehensive investigation, incorporating both morphological and molecular analyses, has unveiled the existence of a hitherto unknown nematode species, Paracapillaria ( Ophidiocapillaria) siamensis sp. nov., residing in the intestine of the monocled cobra, Naja kaouthia, in the central region of Thailand. This study integrates morphological characteristics, morphometric examination, scanning electron microscopy and molecular phylogenetic analysis ( COI, 18S rRNA and ITS1 genes). The findings place the newly described species within the subgenus Ophidiocapillaria, elucidating its distinctive characteristics, including a frame-like proximal spicule shape, approximate lengths of 19 000 and 22 500 μm with approximate widths of 90 and 130 μm for males and females, 39‒45 stichocytes, elevated lips without protrusion, a dorsal bacillary band stripe with an irregular pattern of bacillary cells and evidence of intestinal infection. These features serve to differentiate it from other species within the same subgenus, notably Paracapillaria ( Ophidiocapillaria) najae De, 1998, a species coexisting P. siamensis sp. nov. in the monocled cobra from the same locality. This study addresses the co-infection of the novel species and P. najae within the same snake host, marking the second documented instance of a paracapillariid species in the monocled cobra within the family Elapidae. The genetic characterization supports the formal recognition of P. siamensis sp. nov. as a distinct species, thereby underscoring its taxonomic differentiation within the Capillariidae family. This research identifies and characterizes the new nematode species, contributing valuable insights into the taxonomy of this nematode.

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          MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

          We announce the release of an advanced version of the Molecular Evolutionary Genetics Analysis (MEGA) software, which currently contains facilities for building sequence alignments, inferring phylogenetic histories, and conducting molecular evolutionary analysis. In version 6.0, MEGA now enables the inference of timetrees, as it implements the RelTime method for estimating divergence times for all branching points in a phylogeny. A new Timetree Wizard in MEGA6 facilitates this timetree inference by providing a graphical user interface (GUI) to specify the phylogeny and calibration constraints step-by-step. This version also contains enhanced algorithms to search for the optimal trees under evolutionary criteria and implements a more advanced memory management that can double the size of sequence data sets to which MEGA can be applied. Both GUI and command-line versions of MEGA6 can be downloaded from www.megasoftware.net free of charge.
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            Bioedit: a user friendly biological sequence alignment editor and analysis pogramme for Windows 95/98/NT

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              An Empirical Test of Bootstrapping as a Method for Assessing Confidence in Phylogenetic Analysis

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                Author and article information

                Journal
                Parasitology
                Parasitology
                PAR
                Parasitology
                Cambridge University Press (Cambridge, UK )
                0031-1820
                1469-8161
                April 2024
                04 April 2024
                : 151
                : 5
                : 529-538
                Affiliations
                [1 ]Department of Helminthology, Faculty of Tropical Medicine, Mahidol University , Bangkok, Thailand
                [2 ]Department of Tropical Pathology, Faculty of Tropical Medicine, Mahidol University , Bangkok, Thailand
                [3 ]Snake Farm, Queen Saovabha Memorial Institute, The Thai Red Cross Society , Bangkok, Thailand
                [4 ]Animal Systematics & Molecular Ecology Laboratory and Applied Animal Science Laboratory , Department of Biology, Faculty of Science, Mahidol University , Bangkok, Thailand
                Author notes
                Corresponding author: Urusa Thaenkham; Email: urusa.tha@ 123456mahidol.edu ; Napat Ratnarathorn; Email: napat.rat@ 123456mahidol.ac.th
                Author information
                https://orcid.org/0000-0002-6367-6687
                https://orcid.org/0000-0001-6795-3541
                https://orcid.org/0000-0002-5378-2996
                https://orcid.org/0000-0003-2425-5000
                https://orcid.org/0000-0001-8197-0356
                https://orcid.org/0000-0003-0688-2422
                https://orcid.org/0000-0002-4894-5148
                Article
                S0031182024000404
                10.1017/S0031182024000404
                11106506
                38659195
                665523f4-b0aa-4e3e-a7ff-d21da5a2597b
                © Mahidol University 2024

                This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.

                History
                : 27 December 2023
                : 07 March 2024
                : 28 March 2024
                Page count
                Figures: 3, Tables: 1, References: 54, Pages: 10
                Funding
                Funded by: National Research Council of Thailand (NRCT) and Mahidol University
                Award ID: N42A660912
                Categories
                Research Article

                Parasitology
                gastrointestinal helminth,monocled cobra,morphological and molecular analysis,naja kaouthia,ophidiocapillaria,paracapillaria siamensis

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