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      Large-Scale Evidence for the Effect of the COLIA1 Sp1 Polymorphism on Osteoporosis Outcomes: The GENOMOS Study

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      1 , 2 , 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 , 5 , 6 , 11 , 12 , 10 , 4 , 8 , 8 , 3 , 3 , 11 , 2 , 12 , 4 , 3 , 10 , 2 , 9 , 3 , 7 , 11 , 13 , for the GENOMOS investigators
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          Abstract

          Background

          Osteoporosis and fracture risk are considered to be under genetic control. Extensive work is being performed to identify the exact genetic variants that determine this risk. Previous work has suggested that a G/T polymorphism affecting an Sp1 binding site in the COLIA1 gene is a genetic marker for low bone mineral density (BMD) and osteoporotic fracture, but there have been no very-large-scale studies of COLIA1 alleles in relation to these phenotypes.

          Methods and Findings

          Here we evaluated the role of COLIA1 Sp1 alleles as a predictor of BMD and fracture in a multicenter study involving 20,786 individuals from several European countries. At the femoral neck, the average (95% confidence interval [CI]) BMD values were 25 mg/cm 2 (CI, 16 to 34 mg/cm 2) lower in TT homozygotes than the other genotype groups ( p < 0.001), and a similar difference was observed at the lumbar spine; 21 mg/cm 2 (CI, 1 to 42 mg/cm 2), ( p = 0.039). These associations were unaltered after adjustment for potential confounding factors. There was no association with fracture overall (odds ratio [OR] = 1.01 [CI, 0.95 to 1.08]) in either unadjusted or adjusted analyses, but there was a non-significant trend for association with vertebral fracture and a nominally significant association with incident vertebral fractures in females (OR = 1.33 [CI, 1.00 to 1.77]) that was independent of BMD, and unaltered in adjusted analyses.

          Conclusions

          Allowing for the inevitable heterogeneity between participating teams, this study—which to our knowledge is the largest ever performed in the field of osteoporosis genetics for a single gene—demonstrates that the COLIA1 Sp1 polymorphism is associated with reduced BMD and could predispose to incident vertebral fractures in women, independent of BMD. The associations we observed were modest however, demonstrating the importance of conducting studies that are adequately powered to detect and quantify the effects of common genetic variants on complex diseases.

          Abstract

          A large collaborative European study finds only weak links between a much studied potential genetic risk factor and bone mineral density or fracture risk.

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          Most cited references27

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          Spurious precision? Meta-analysis of observational studies.

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            Testing heterozygote excess and deficiency.

            Currently used tests of Hardy-Weinberg proportions do not take into account the nature of the alternative hypothesis, which is generally a heterozygote deficiency. Different exact tests, appropriate for small sample size and large number of alleles, are proposed in this perspective, and their properties are evaluated by power comparisons. Some tests are found to be close to optimal for the detection of inbreeding or heterozygote excess, one of which is a score test closely related to Robertson and Hill's estimator of the inbreeding coefficient. This test is also easily applied to multiple samples. Such tests are not always the most appropriate if alternative hypotheses differ from those considered here.
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              A COL1A1 Sp1 binding site polymorphism predisposes to osteoporotic fracture by affecting bone density and quality.

              Osteoporosis is a common disease with a strong genetic component. We previously described a polymorphic Sp1 binding site in the COL1A1 gene that has been associated with osteoporosis in several populations. Here we explore the molecular mechanisms underlying this association. A meta-analysis showed significant associations between COL1A1 "s" alleles and bone mineral density (BMD), body mass index (BMI), and osteoporotic fractures. The association with fracture was stronger than expected on the basis of the observed differences in BMD and BMI, suggesting an additional effect on bone strength. Gel shift assays showed increased binding affinity of the "s" allele for Sp1 protein, and primary RNA transcripts derived from the "s" allele were approximately three times more abundant than "S" allele--derived transcripts in "Ss" heterozygotes. Collagen produced from osteoblasts cultured from "Ss" heterozygotes had an increased ratio of alpha 1(I) protein relative to alpha 2(I), and this was accompanied by an increased ratio of COL1A1 mRNA relative to COL1A2. Finally, the yield strength of bone derived from "Ss" individuals was reduced when compared with bone derived from "SS" subjects. We conclude that the COL1A1 Sp1 polymorphism is a functional genetic variant that predisposes to osteoporosis by complex mechanisms involving changes in bone mass and bone quality.
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                Author and article information

                Contributors
                Role: Academic Editor
                Journal
                PLoS Med
                pmed
                PLoS Medicine
                Public Library of Science (San Francisco, USA )
                1549-1277
                1549-1676
                April 2006
                21 February 2006
                : 3
                : 4
                : e90
                Affiliations
                [1] 1Rheumatic Diseases Unit, University of Edinburgh, Western General Hospital Edinburgh, Edinburgh, United Kingdom
                [2] 2Department of Medicine and Therapeutics, University of Aberdeen Medical School, Aberdeen, United Kingdom
                [3] 3Department of Internal Medicine, Erasmus MC, Rotterdam, Netherlands
                [4] 4Department of Internal Medicine, University of Florence, Florence, Italy
                [5] 5Department of Genetics, University of Barcelona, Barcelona, Spain
                [6] 6Department of Endocrinology, Aarhus Sygehus, Aarhus, Denmark
                [7] 7Institute for Research in Extramural Medicine, VU University Medical Center, Amsterdam, Netherlands
                [8] 8Department of Biochemistry and Experimental Medicine, The Children's Memorial Health Institute, Warsaw, Poland
                [9] 9Department of Endocrinology and Nuclear Medicine, University of Graz, Graz, Austria
                [10] 10Strangeways Research Laboratory, Cambridge University, Cambridge, United Kingdom
                [11] 11Oxagen Limited, Abingdon, United Kingdom
                [12] 12Hospital del Mar-IMIM, Universitat Autònoma de Barcelona, Barcelona, Spain
                [13] 13Clinical and Molecular Epidemiology Unit, Department of Hygiene and Epidemiology, University of Ioannina School of Medicine and Biomedical Research Institute, Foundation for Research and Technology-Hellas, Ioannina, Greece
                Guy's Hospital United Kingdom
                Author notes
                * To whom correspondence should be addressed. E-mail: jioannid@ 123456cc.uoi.gr

                Author Contributions: Author contributions and additional contributors are listed at the end of this paper.

                Competing Interests: SHR, AGU, HAPP, and JPTMvL hold patents on the use of various genetic markers for the diagnosis of osteoporosis, including the COLIA1 Sp1 polymorphism.

                Article
                10.1371/journal.pmed.0030090
                1370920
                16475872
                630c2034-9dc4-46d5-aee0-5b4c1de7c17d
                Copyright: © 2006 Ralston et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
                History
                : 11 November 2005
                : 12 December 2005
                Categories
                Research Article
                Genetics/Genomics/Gene Therapy
                Epidemiology/Public Health
                Geriatrics
                Orthopedics
                Rheumatology
                Women's Health
                Epidemiology
                Genetics
                Geriatric Medicine
                Osteoporosis

                Medicine
                Medicine

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