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      RNA-Seq analysis reveals the growth and photosynthetic responses of rapeseed ( Brassica napus L.) under red and blue LEDs with supplemental yellow, green, or white light

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          Abstract

          Compound light is required for plant growth and development, but the response mechanisms of plants are undercharacterized and not fully understood. The present study was undertaken to evaluate the effect of supplemental light (green light, G; white light, W; yellow light, Y) added to red–blue light (RB) and sole W on the growth and photosynthesis of rapeseed seedlings. The results revealed that supplemental G/W improved the growth and photosynthesis of seedlings, but supplemental Y significantly reduced the photosynthetic rate and palisade tissue layer. Sole W caused similar responses in terms of growth, leaf development, oxidative damage, and antioxidant capability as supplemental Y. In total, 449, 367, 813, and 751 differentially expressed genes (DEGs) were identified under supplemental G, Y, and W and sole W, respectively, compared to RB. The DEGs under different lights were closely associated with pathways such as light stimulus and high-light response, root growth, leaf development, photosynthesis, photosynthesis-antenna proteins, carbohydrate synthesis and degradation, secondary metabolism, plant hormones, and antioxidant capacity, which contributed to the distinct growth and photosynthesis under different treatments. Our results suggest that Y is more likely substituted by other wavelengths to achieve certain effects similar to those of supplemental Y, while G has a more distinctive effect on rapeseed. Taken together, supplementation RB with G/W promotes the growth of rapeseed seedlings in a controlled environment.

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          [136] Assay of catalases and peroxidases

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            Photoperoxidation in isolated chloroplasts. I. Kinetics and stoichiometry of fatty acid peroxidation.

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              Light-regulated transcriptional networks in higher plants.

              Plants have evolved complex and sophisticated transcriptional networks that mediate developmental changes in response to light. These light-regulated processes include seedling photomorphogenesis, seed germination and the shade-avoidance and photoperiod responses. Understanding the components and hierarchical structure of the transcriptional networks that are activated during these processes has long been of great interest to plant scientists. Traditional genetic and molecular approaches have proved powerful in identifying key regulatory factors and their positions within these networks. Recent genomic studies have further revealed that light induces massive reprogramming of the plant transcriptome, and that the early light-responsive genes are enriched in transcription factors. These combined approaches provide new insights into light-regulated transcriptional networks.
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                Author and article information

                Contributors
                liuxy@njau.edu.cn
                xuzhigang@njau.edu.cn
                Journal
                Hortic Res
                Hortic Res
                Horticulture Research
                Nature Publishing Group UK (London )
                2662-6810
                2052-7276
                1 December 2020
                1 December 2020
                2020
                : 7
                : 206
                Affiliations
                [1 ]GRID grid.27871.3b, ISNI 0000 0000 9750 7019, College of Agriculture, , Nanjing Agricultural University, ; 210095 Nanjing, China
                [2 ]GRID grid.27871.3b, ISNI 0000 0000 9750 7019, College of Horticulture, , Nanjing Agricultural University, ; 210095 Nanjing, China
                [3 ]GRID grid.462795.b, ISNI 0000 0004 0635 1987, Department of Horticulture, , Sher-e-Bangla Agricultural University, ; Dhaka, 1207 Bangladesh
                [4 ]GRID grid.411680.a, ISNI 0000 0001 0514 4044, College of Agriculture, , Shihezi University, ; 832003 Shihezi, China
                Article
                429
                10.1038/s41438-020-00429-3
                7705657
                615ee27d-75b7-45ec-8603-eea576750597
                © The Author(s) 2020

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 22 April 2019
                : 2 September 2020
                : 8 October 2020
                Funding
                Funded by: This work was supported by the National Key R&D Program of China [grant number 2017YFB0403903]; the National 863 High Technology Program of China [grant number 2013AA103003]; and the Student Research Training Project of Nanjing Agricultural University [grant number 1003A13].
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                © The Author(s) 2020

                light responses,plant physiology
                light responses, plant physiology

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