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      Characterization and biological applications of gonadal extract of Paracentrotus lividus collected along the Mediterranean coast of Alexandria, Egypt

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          Abstract

          Marine invertebrates represent a valuable reservoir of pharmaceutical bioactive compounds with potential relevance to various medical applications. These compounds exhibit notable advantages when compared to their terrestrial counterparts, in terms of their potency, activity, and mechanism of action. Within this context, the present work aimed to extract, chemically characterize, and investigate the bioactivity of the gonadal extract of the sea urchin Paracentrotus lividus ( P. lividus) collected along the Mediterranean coast of Alexandria, Egypt. Fractions of the gonadal extract were characterized by Spectrophotometry and gas chromatography-mass spectrometry (GC-MS), and their bioactivities were investigated in vitro. The analysis supported the extract richness of carotenoids and bioactive compounds. The extract showed promising anticancer activity against three different breast cancer cell lines with different levels of aggressiveness and causative factors, namely MDA-MB-231, MDA-MB-453, and HCC-1954. Gene expression analysis using RT-qPCR showed that P. lividus extract inhibited the expression of crucial factors involved in cell cycle regulation and apoptosis. In addition, the extract significantly inhibited the lipo-polysaccharides (LPS) induced inflammation in the RAW264.7 macrophage cell line and exerted anti-bacterial activity against the Gram-negative bacteria Klebsiella pneumoniae and Pseudomonas aeruginosa. Collectively, these results demonstrated the chemical richness and the wide-scale applicability of P. lividus gonadal extract as an anti-cancer, anti-bacterial, and anti-inflammatory natural extract.

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          Analyzing real-time PCR data by the comparative CT method

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            Agar and broth dilution methods to determine the minimal inhibitory concentration (MIC) of antimicrobial substances.

            The aim of broth and agar dilution methods is to determine the lowest concentration of the assayed antimicrobial agent (minimal inhibitory concentration, MIC) that, under defined test conditions, inhibits the visible growth of the bacterium being investigated. MIC values are used to determine susceptibilities of bacteria to drugs and also to evaluate the activity of new antimicrobial agents. Agar dilution involves the incorporation of different concentrations of the antimicrobial substance into a nutrient agar medium followed by the application of a standardized number of cells to the surface of the agar plate. For broth dilution, often determined in 96-well microtiter plate format, bacteria are inoculated into a liquid growth medium in the presence of different concentrations of an antimicrobial agent. Growth is assessed after incubation for a defined period of time (16-20 h) and the MIC value is read. This protocol applies only to aerobic bacteria and can be completed in 3 d.
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              Natural products in drug discovery: advances and opportunities

              Natural products and their structural analogues have historically made a major contribution to pharmacotherapy, especially for cancer and infectious diseases. Nevertheless, natural products also present challenges for drug discovery, such as technical barriers to screening, isolation, characterization and optimization, which contributed to a decline in their pursuit by the pharmaceutical industry from the 1990s onwards. In recent years, several technological and scientific developments — including improved analytical tools, genome mining and engineering strategies, and microbial culturing advances — are addressing such challenges and opening up new opportunities. Consequently, interest in natural products as drug leads is being revitalized, particularly for tackling antimicrobial resistance. Here, we summarize recent technological developments that are enabling natural product-based drug discovery, highlight selected applications and discuss key opportunities.
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                Author and article information

                Contributors
                Role: Formal analysisRole: InvestigationRole: MethodologyRole: Writing – original draft
                Role: ConceptualizationRole: SupervisionRole: Writing – review & editing
                Role: ConceptualizationRole: SupervisionRole: Writing – review & editing
                Role: Formal analysisRole: InvestigationRole: ValidationRole: Visualization
                Role: Supervision
                Role: ConceptualizationRole: SupervisionRole: Writing – review & editing
                Role: Editor
                Journal
                PLoS One
                PLoS One
                plos
                PLOS ONE
                Public Library of Science (San Francisco, CA USA )
                1932-6203
                2 January 2024
                2024
                : 19
                : 1
                : e0296312
                Affiliations
                [1 ] Department of Zoology, Faculty of Science, Alexandria University, Alexandria, Egypt
                [2 ] Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden
                [3 ] Department of Pathology, Faculty of Medicine, Alexandria University, Alexandria, Egypt
                [4 ] National Institute of Oceanography and Fisheries (NIOF), Cairo, Egypt
                Cairo University, Faculty of Science, EGYPT
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                Author information
                https://orcid.org/0000-0002-4902-0550
                https://orcid.org/0000-0001-6170-4907
                Article
                PONE-D-23-27303
                10.1371/journal.pone.0296312
                10760885
                38166099
                6018bd06-6c37-47b4-87f1-f2d60f4c139e
                © 2024 Nagy et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 24 August 2023
                : 9 December 2023
                Page count
                Figures: 3, Tables: 4, Pages: 18
                Funding
                The author(s) received no specific funding for this work.
                Categories
                Research Article
                Physical Sciences
                Materials Science
                Materials
                Pigments
                Organic Pigments
                Carotenoids
                Research and Analysis Methods
                Animal Studies
                Experimental Organism Systems
                Animal Models
                Sea Urchins
                Biology and Life Sciences
                Organisms
                Eukaryota
                Animals
                Invertebrates
                Echinoderms
                Sea Urchins
                Biology and Life Sciences
                Zoology
                Animals
                Invertebrates
                Echinoderms
                Sea Urchins
                Physical Sciences
                Chemistry
                Chemical Compounds
                Esters
                Medicine and Health Sciences
                Oncology
                Cancers and Neoplasms
                Breast Tumors
                Breast Cancer
                Research and Analysis Methods
                Chromatographic Techniques
                Gas Chromatography-Mass Spectrometry
                Physical Sciences
                Chemistry
                Analytical Chemistry
                Mass Spectrometry
                Gas Chromatography-Mass Spectrometry
                Research and Analysis Methods
                Spectrum Analysis Techniques
                Mass Spectrometry
                Gas Chromatography-Mass Spectrometry
                Biology and Life Sciences
                Anatomy
                Reproductive System
                Genital Anatomy
                Gonads
                Medicine and Health Sciences
                Anatomy
                Reproductive System
                Genital Anatomy
                Gonads
                Biology and Life Sciences
                Biochemistry
                Lipids
                Fatty Acids
                Biology and Life Sciences
                Biochemistry
                Neurochemistry
                Neurochemicals
                Nitric Oxide
                Biology and Life Sciences
                Neuroscience
                Neurochemistry
                Neurochemicals
                Nitric Oxide
                Custom metadata
                All relevant data are within the paper and its Supporting Information files.

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