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      The food web in a subterranean ecosystem is driven by intraguild predation

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          Abstract

          Trophic interactions of cave arthropods have been understudied. We used molecular methods (NGS) to decipher the food web in the subterranean ecosystem of the Ardovská Cave (Western Carpathians, Slovakia). We collected five arthropod predators of the species Parasitus loricatus (gamasid mites), Eukoenenia spelaea (palpigrades), Quedius mesomelinus (beetles), and Porrhomma profundum and Centromerus cavernarum (both spiders) and prey belonging to several orders. Various arthropod orders were exploited as prey, and trophic interactions differed among the predators. Linear models were used to compare absolute and relative prey body sizes among the predators. Quedius exploited relatively small prey, while Eukoenenia and Parasitus fed on relatively large prey. Exploitation of eggs or cadavers is discussed. In contrast to previous studies, Eukoenenia was found to be carnivorous. A high proportion of intraguild predation was found in all predators. Intraspecific consumption (most likely cannibalism) was detected only in mites and beetles. Using Pianka’s index, the highest trophic niche overlaps were found between Porrhomma and Parasitus and between Centromerus and Eukoenenia, while the lowest niche overlap was found between Parasitus and Quedius. Contrary to what we expected, the high availability of Diptera and Isopoda as a potential prey in the studied system was not corroborated. Our work demonstrates that intraguild diet plays an important role in predators occupying subterranean ecosystems.

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          Cutadapt removes adapter sequences from high-throughput sequencing reads

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            DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates.

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            We describe "universal" DNA primers for polymerase chain reaction (PCR) amplification of a 710-bp fragment of the mitochondrial cytochrome c oxidase subunit I gene (COI) from 11 invertebrate phyla: Echinodermata, Mollusca, Annelida, Pogonophora, Arthropoda, Nemertinea, Echiura, Sipuncula, Platyhelminthes, Tardigrada, and Coelenterata, as well as the putative phylum Vestimentifera. Preliminary comparisons revealed that these COI primers generate informative sequences for phylogenetic analyses at the species and higher taxonomic levels.
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                Author and article information

                Contributors
                andrea.parimuchova@upjs.sk
                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group UK (London )
                2045-2322
                2 March 2021
                2 March 2021
                2021
                : 11
                : 4994
                Affiliations
                [1 ]GRID grid.11175.33, ISNI 0000 0004 0576 0391, Department of Zoology, Institute of Biology and Ecology, Faculty of Science, , P. J. Šafárik University, ; Šrobárova 2, 041 54 Košice, Slovakia
                [2 ]GRID grid.10267.32, ISNI 0000 0001 2194 0956, Department of Botany and Zoology, Faculty of Science, , Masaryk University, ; Kotlářská 2, 611 37 Brno, Czech Republic
                [3 ]GRID grid.10267.32, ISNI 0000 0001 2194 0956, Central European Institute of Technology, , Masaryk University, ; Kamenice 5, 625 00 Brno, Czech Republic
                Article
                84521
                10.1038/s41598-021-84521-1
                7925651
                33654189
                5cb322bf-de21-47fd-aa11-23d033f6b8c7
                © The Author(s) 2021

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 19 June 2020
                : 9 February 2021
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100005357, Agentúra na Podporu Výskumu a Vývoja;
                Award ID: APVV-17-0477
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100006109, Vedecká Grantová Agentúra MŠVVaŠ SR a SAV;
                Award ID: VEGA1/0346/18
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100003335, Ministry of Education, Youth and Science;
                Award ID: LM2018132
                Categories
                Article
                Custom metadata
                © The Author(s) 2021

                Uncategorized
                ecology,molecular biology,zoology,environmental sciences
                Uncategorized
                ecology, molecular biology, zoology, environmental sciences

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