3
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Epigenetic Regulation of Angiogenesis in Peripheral Artery Disease

      review-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Peripheral arterial disease (PAD) represents a global health concern with a rising prevalence attributed to factors such as obesity, diabetes, aging, and smoking. Among patients with PAD, chronic limb-threatening ischemia (CLTI) is the most severe manifestation, associated with substantial morbidity and mortality. While revascularization remains the primary therapy for CLTI, not all patients are candidates for such interventions, highlighting the need for alternative approaches. Impaired angiogenesis, the growth of new blood vessels, is a central feature of PAD, and despite decades of research, effective clinical treatments remain elusive. Epigenetics, the study of heritable changes in gene expression, has gained prominence in understanding PAD pathogenesis. Here, we explore the role of epigenetic regulation in angiogenesis within the context of PAD, with a focus on long non-coding RNAs and fibroblast-endothelial cell transdifferentiation. Additionally, we discuss the interplay between metabolic control and epigenetic regulation, providing insights into potential novel therapeutic avenues for improving PAD treatments. This review aims to offer a concise update on the application of epigenetics in angiogenesis and PAD research, inspiring further investigations in this promising field.

          Related collections

          Most cited references78

          • Record: found
          • Abstract: found
          • Article: not found

          Functional Classification and Experimental Dissection of Long Noncoding RNAs

          Over the last decade, it has been increasingly demonstrated that the genomes of many species are pervasively transcribed, resulting in the production of numerous long noncoding RNAs (lncRNAs). At the same time, it is now appreciated that many types of DNA regulatory elements, such as enhancers and promoters, regularly initiate bidirectional transcription. Thus, discerning functional noncoding transcripts from a vast transcriptome is a paramount priority, and challenge, for the lncRNA field. In this review, we aim to provide a conceptual and experimental framework for classifying and elucidating lncRNA function. We categorize lncRNA loci into those that regulate gene expression in cis versus those that perform functions in trans , and propose an experimental approach to dissect lncRNA activity based on these classifications. These strategies to further understand lncRNAs promise to reveal new and unanticipated biology, with great potential to advance our understanding of normal physiology and disease.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Regulation of chromatin by histone modifications.

            Chromatin is not an inert structure, but rather an instructive DNA scaffold that can respond to external cues to regulate the many uses of DNA. A principle component of chromatin that plays a key role in this regulation is the modification of histones. There is an ever-growing list of these modifications and the complexity of their action is only just beginning to be understood. However, it is clear that histone modifications play fundamental roles in most biological processes that are involved in the manipulation and expression of DNA. Here, we describe the known histone modifications, define where they are found genomically and discuss some of their functional consequences, concentrating mostly on transcription where the majority of characterisation has taken place.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Metabolic regulation of gene expression by histone lactylation

              The Warburg effect, originally describing augmented lactogenesis in cancer, is associated with diverse cellular processes such as angiogenesis, hypoxia, macrophage polarization, and T-cell activation. This phenomenon is intimately linked with multiple diseases including neoplasia, sepsis, and autoimmune diseases 1,2 . Lactate, a compound generated during Warburg effect, is widely known as an energy source and metabolic byproduct. However, its non-metabolic functions in physiology and disease remain unknown. Here we report lactate-derived histone lysine lactylation as a new epigenetic modification and demonstrate that histone lactylation directly stimulates gene transcription from chromatin. In total, we identify 28 lactylation sites on core histones in human and mouse cells. Hypoxia and bacterial challenges induce production of lactate through glycolysis that in turn serves as precursor for stimulating histone lactylation. Using bacterially exposed M1 macrophages as a model system, we demonstrate that histone lactylation has different temporal dynamics from acetylation. In the late phase of M1 macrophage polarization, elevated histone lactylation induces homeostatic genes involved in wound healing including arginase 1. Collectively, our results suggest the presence of an endogenous “lactate clock” in bacterially challenged M1 macrophages that turns on gene expression to promote homeostasis. Histone lactylation thus represents a new avenue for understanding the functions of lactate and its role in diverse pathophysiological conditions, including infection and cancer.
                Bookmark

                Author and article information

                Contributors
                Journal
                Methodist Debakey Cardiovasc J
                Methodist Debakey Cardiovasc J
                1947-6108
                Methodist DeBakey Cardiovascular Journal
                Houston Methodist DeBakey Heart & Vascular Center
                1947-6094
                1947-6108
                16 November 2023
                2023
                : 19
                : 5
                : 47-57
                Affiliations
                [1 ]Beckman Research Institute City of Hope, Duarte, California, US
                [2 ]Duke University Medical Center, Durham, North Carolina, US
                [3 ]Houston Methodist Research Institute, Houston, Texas, US
                Author notes
                CORRESPONDING AUTHORS: Zhen Bouman Chen, MB, PhD Beckman Research Institute, City of Hope, Duarte, California, US Lzhenchen@ 123456coh.org ; Li Lai, PhD Houston Methodist Research Institute, Houston, Texas, US llai@ 123456houstonmethodist.org
                Author information
                https://orcid.org/0000-0002-8981-2974
                https://orcid.org/0000-0002-0306-2130
                https://orcid.org/0000-0002-5731-2705
                https://orcid.org/0000-0002-3291-1090
                Article
                10.14797/mdcvj.1294
                10655766
                587b3bba-a955-4bad-86d5-f91be6120214
                Copyright: © 2023 The Author(s)

                This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (CC-BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. See http://creativecommons.org/licenses/by/4.0/.

                History
                : 18 September 2023
                : 19 September 2023
                Funding
                Funded by: NIH, doi open-funder-registry10.13039/open_funder_registry10.13039/100000002;
                Award ID: R01HL145170
                Funded by: Ella Fitzgerald Foundation;
                Funded by: City of Hope, doi open-funder-registry10.13039/open_funder_registry10.13039/100007363;
                Award ID: R56HL169204-01
                This work is funded in part by R01HL145170 from the NIH, Ella Fitzgerald Foundation, and a City of Hope-HBCU pilot project (to ZBC) and R56HL169204-01 (to LL).
                Categories
                Review

                epigenetics,peripheral arterial disease (pad),hindlimb ischemia (hli),angiogenesis,long non-coding rnas (lncrnas),fibroblast-endothelial transdifferentiation

                Comments

                Comment on this article