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      Production and applications of fluorobody from redox-engineered Escherichia coli

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          Abstract

          Abstract

          Efficient selection and production of antibody fragments in microbial systems remain to be a challenging process. To optimize microbial production of single-chain variable fragments (scFvs), we have chosen five model targets, 1) a hapten, Zearalenone (ZEN) mycotoxin, along with infectious agents 2) rabies virus, 3) Propionibacterium acnes, 4) Pseudomonas aeruginosa, and a cancer cell 5) acute myeloid leukemia cell line (HL-60). The scFv binders were affinity selected from a non-immunized human phage display scFv antibody library and genetically fused to the N-terminus of emerald green fluorescent protein (EmGFP). The scFv-EmGFP fusion constructs were subcloned into an expression vector, under the control of T7 promoter, C-terminally tagged with hexa-histidine and expressed in different Escherichia coli ( E. coli) hosts. This enabled the detection of cells that expressed the correct scFv-EmGFP fusion, termed fluorobody, via bright fluorescent signal in the cytoplasm. Among the three E. coli hosts tested, an engineered E. coli B strain called SHuffle B that promotes disulfide bond formation in the cytoplasm appeared to be the most appropriate host. The recombinant fluorobodies were well expressed (2–8 mg/L), possessed the fluorescence property of EmGFP, and retained the ability to bind to their cognate targets. Their specific bindings were demonstrated by ELISA, fluorescence-linked immunosorbent assay (FLISA), flow cytometry, and fluorescent microscope imaging. The fluorobody expression platform in this study could be further adopted as a one-step immunostaining technique based on scFv, isolated from phage display library to numerous desired targets.

          Key points

          E. coli SHuffle express T7 is a suitable expression host for scFv-EmGFP (fluorobody)

          Only the clones harboring scFv-EmGFP plasmid will show bright fluorescent signal

          This platform can be used to produce fluorobodies for numerous purposes

          Graphical abstract

          Supplementary Information

          The online version contains supplementary material available at 10.1007/s00253-023-12395-6.

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          Most cited references44

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          A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

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            Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

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              The green fluorescent protein.

              R Tsien (1998)
              In just three years, the green fluorescent protein (GFP) from the jellyfish Aequorea victoria has vaulted from obscurity to become one of the most widely studied and exploited proteins in biochemistry and cell biology. Its amazing ability to generate a highly visible, efficiently emitting internal fluorophore is both intrinsically fascinating and tremendously valuable. High-resolution crystal structures of GFP offer unprecedented opportunities to understand and manipulate the relation between protein structure and spectroscopic function. GFP has become well established as a marker of gene expression and protein targeting in intact cells and organisms. Mutagenesis and engineering of GFP into chimeric proteins are opening new vistas in physiological indicators, biosensors, and photochemical memories.
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                Author and article information

                Contributors
                berkmen@neb.com
                montarop@g.sut.ac.th , montarop@sut.ac.th
                Journal
                Appl Microbiol Biotechnol
                Appl Microbiol Biotechnol
                Applied Microbiology and Biotechnology
                Springer Berlin Heidelberg (Berlin/Heidelberg )
                0175-7598
                1432-0614
                2 February 2023
                2 February 2023
                2023
                : 107
                : 5-6
                : 1959-1970
                Affiliations
                [1 ]GRID grid.6357.7, ISNI 0000 0001 0739 3220, School of Biotechnology, Institute of Agricultural Technology, , Suranaree University of Technology, ; Nakhon Ratchasima, 30000 Thailand
                [2 ]GRID grid.273406.4, ISNI 0000 0004 0376 1796, New England Biolabs, ; Ipswich, MA 01938 USA
                Author information
                http://orcid.org/0000-0003-2674-2419
                Article
                12395
                10.1007/s00253-023-12395-6
                10050041
                36729226
                56649492-9582-4b2a-a38c-9a17e7785fad
                © The Author(s) 2023, corrected publication 2023

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 26 October 2022
                : 11 January 2023
                : 17 January 2023
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100017170, Thailand Science Research and Innovation;
                Award ID: RTA6180012
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100012309, Royal Golden Jubilee (RGJ) Ph.D. Programme;
                Award ID: PHD/0191/2557
                Award ID: PHD/0098/2553
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100004704, National Research Council of Thailand;
                Award ID: NRCT 808/2563
                Award Recipient :
                Categories
                Methods and Protocols
                Custom metadata
                © Springer-Verlag GmbH Germany, part of Springer Nature 2023

                Biotechnology
                emerald green fluorescent protein (emgfp),single-chain variable fragment (scfv),fusion,fluorobody,immunofluorescence,e. coli shuffle

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