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      BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis

      , , ,
      Bioinformatics
      Oxford University Press (OUP)

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          Abstract

          BUCKy is a C++ program that implements Bayesian concordance analysis. The method uses a non-parametric clustering of genes with compatible trees, and reconstructs the primary concordance tree from clades supported by the largest proportions of genes. A population tree with branch lengths in coalescent units is estimated from quartet concordance factors. BUCKy is open source and distributed under the GNU general public license at www.stat.wisc.edu/∼ane/bucky/.

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          Author and article information

          Journal
          Bioinformatics
          Oxford University Press (OUP)
          1460-2059
          1367-4803
          November 15 2010
          November 15 2010
          September 21 2010
          November 15 2010
          November 15 2010
          September 21 2010
          : 26
          : 22
          : 2910-2911
          Article
          10.1093/bioinformatics/btq539
          20861028
          4d4d4a79-99e6-4cac-a5a9-aa626e5986fd
          © 2010
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