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      Dynamics of the impacts of Pratylenchus penetrans on Gisela® cherry rootstocks

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          Abstract

          Sweet cherry growers are increasingly using semi-dwarfing rootstocks, including the Gisela® series, when replanting orchards. Little is known of the susceptibility of these new cherry rootstocks to Pratylenchus penetrans, a recognized pest of temperate fruit trees worldwide. Two field experiments were planted in 2010, one in the Okanagan Valley of British Columbia and one in the Annapolis Valley of Nova Scotia. Each experiment was a factorial combination of three rootstocks (Gi.3, Gi.5, and Gi.6) × three training systems, with six replicate four-tree plots of each of the nine combinations. Both sites were fumigated prior to planting and population densities of P. penetrans in roots and root-zone soil were subsequently monitored from 2013 through 2017. None of the P. penetrans population parameters (nematodes/kg soil, nematodes/g fine root, and nematodes/kg soil including roots) differed among rootstocks at either site, suggesting that the rootstocks did not differ in their ability to host P. penetrans. At the British Columbia site only there was an inverse relationship between P. penetrans population densities and tree size for Gi.3 trees in four years and for Gi.6 in 2017, suggesting that Gi.3 rootstock is less tolerant than Gi.5 and Gi.6 rootstocks.

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          Discrimination of six pratylenchus species using PCR and species-specific primers.

          A PCR-based assay for identification of six species of Pratylenchus common in California is described. In this assay, five forward species-specific primers were designed from the internal variable portion of the D3 expansion region of the 26S rDNA and were each used with a single, common reverse primer. The optimized species-specific primers produced unique amplicons from their respective target and did not amplify DNA from other Pratylenchus species. With this assay we were able to identify single females to species level. This method obviates the need for subsequent RFLP or sequence analysis of the PCR product and can be used as a rapid diagnostic tool in epidemiological and management studies.
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            DIAGNOSIS, ETIOLOGY AND MANAGEMENT OF REPLANT DISORDERS IN NEW YORK CHERRY AND APPLE ORCHARDS

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              Phylogenetic analysis of nematodes of the genus Pratylenchus using nuclear 26S rDNA.

              We used nucleotide sequences of the large subunit ribosomal genes (26S rDNA) to examine evolutionary relationships among species of the genus Pratylenchus (Order: Tylenchida, Family: Pratylenchidae), commonly known as root-lesion nematodes. Ten species of Pratylenchus were studied including, P. penetrans, P. crenatus, P. minyus, P. vulnus, P. thornei, P. musicola, P. coffeae, P. hexincisus, P. scribneri, and P. brachyurus. The species Hirschmanniella belli, Meloidogyne javanica, Heterorhabditis bacteriophora, Nacobbus aberrans, Radopholus similis, and Xiphinema index were used as outgroups. Based on parsimony analyses of approximately 307 aligned nucleotides of the D3 expansion region of the 26S rDNA, it is clear that species of Pratylenchus are a paraphyletic assemblage. The outgroup taxon H. belli shares a common ancestor with the clade that includes P. vulnus and P. crenatus while N. aberrans and R. similis share a common ancestor with 5 other species included in this study.
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                Author and article information

                Journal
                J Nematol
                J. Nematol
                JOFNEM
                exeley
                Journal of Nematology
                Exeley Inc.
                0022-300X
                2640-396X
                2019
                15 April 2019
                : 51
                : e2019-08
                Affiliations
                [1 ]Agriculture and Agri-Food Canada , 4200 Hwy 97, Summerland, BC V0H 1Z0, Canada
                [2 ]Agriculture and Agri-Food Canada , 32 Main Street, Kentville, NS B4N 1J5, Canada
                Author notes

                This paper was edited by: James A. LaMondia.

                Article
                e2019-08
                10.21307/jofnem-2019-008
                6929660
                31088020
                4bc54a5a-cdb2-472b-b58d-886456e99d2f
                © 2019 Authors

                This is an Open Access article licensed under the Creative Commons CC BY 4.0 license, https://creativecommons.org/licenses/by/4.0/

                History
                : 16 November 2018
                Categories
                Life Sciences

                lesion nematode,pratylenchus penetrans,rootstock,orchard,host-parasite relationship,plant disease loss

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