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      Silage maize as a potent candidate for sustainable animal husbandry development—perspectives and strategies for genetic enhancement

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          Abstract

          Maize is recognized as the queen of cereals, with an ability to adapt to diverse agroecologies (from 58 oN to 55 oS latitude) and the highest genetic yield potential among cereals. Under contemporary conditions of global climate change, C 4 maize crops offer resilience and sustainability to ensure food, nutritional security, and farmer livelihood. In the northwestern plains of India, maize is an important alternative to paddy for crop diversification in the wake of depleting water resources, reduced farm diversity, nutrient mining, and environmental pollution due to paddy straw burning. Owing to its quick growth, high biomass, good palatability, and absence of anti-nutritional components, maize is also one of the most nutritious non-legume green fodders. It is a high-energy, low-protein forage commonly used for dairy animals like cows and buffalos, often in combination with a complementary high-protein forage such as alfalfa. Maize is also preferred for silage over other fodders due to its softness, high starch content, and sufficient soluble sugars required for proper ensiling. With a rapid population increase in developing countries like China and India, there is an upsurge in meat consumption and, hence, the requirement for animal feed, which entails high usage of maize. The global maize silage market is projected to grow at a compound annual growth rate of 7.84% from 2021 to 2030. Factors such as increasing demand for sustainable and environment-friendly food sources coupled with rising health awareness are fueling this growth. With the dairy sector growing at about 4%–5% and the increasing shortage faced for fodder, demand for silage maize is expected to increase worldwide. The progress in improved mechanization for the provision of silage maize, reduced labor demand, lack of moisture-related marketing issues as associated with grain maize, early vacancy of farms for next crops, and easy and economical form of feed to sustain household dairy sector make maize silage a profitable venture. However, sustaining the profitability of this enterprise requires the development of hybrids specific for silage production. Little attention has yet been paid to breeding for a plant ideotype for silage with specific consideration of traits such as dry matter yield, nutrient yield, energy in organic matter, genetic architecture of cell wall components determining their digestibility, stalk standability, maturity span, and losses during ensiling. This review explores the available information on the underlying genetic mechanisms and gene/gene families impacting silage yield and quality. The trade-offs between yield and nutritive value in relation to crop duration are also discussed. Based on available genetic information on inheritance and molecular aspects, breeding strategies are proposed to develop maize ideotypes for silage for the development of sustainable animal husbandry.

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          The B73 maize genome: complexity, diversity, and dynamics.

          We report an improved draft nucleotide sequence of the 2.3-gigabase genome of maize, an important crop plant and model for biological research. Over 32,000 genes were predicted, of which 99.8% were placed on reference chromosomes. Nearly 85% of the genome is composed of hundreds of families of transposable elements, dispersed nonuniformly across the genome. These were responsible for the capture and amplification of numerous gene fragments and affect the composition, sizes, and positions of centromeres. We also report on the correlation of methylation-poor regions with Mu transposon insertions and recombination, and copy number variants with insertions and/or deletions, as well as how uneven gene losses between duplicated regions were involved in returning an ancient allotetraploid to a genetically diploid state. These analyses inform and set the stage for further investigations to improve our understanding of the domestication and agricultural improvements of maize.
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            Genomic Selection in Plant Breeding: Methods, Models, and Perspectives.

            Genomic selection (GS) facilitates the rapid selection of superior genotypes and accelerates the breeding cycle. In this review, we discuss the history, principles, and basis of GS and genomic-enabled prediction (GP) as well as the genetics and statistical complexities of GP models, including genomic genotype×environment (G×E) interactions. We also examine the accuracy of GP models and methods for two cereal crops and two legume crops based on random cross-validation. GS applied to maize breeding has shown tangible genetic gains. Based on GP results, we speculate how GS in germplasm enhancement (i.e., prebreeding) programs could accelerate the flow of genes from gene bank accessions to elite lines. Recent advances in hyperspectral image technology could be combined with GS and pedigree-assisted breeding.
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              Silage review: Interpretation of chemical, microbial, and organoleptic components of silages

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                Author and article information

                Contributors
                Journal
                Front Genet
                Front Genet
                Front. Genet.
                Frontiers in Genetics
                Frontiers Media S.A.
                1664-8021
                26 May 2023
                2023
                : 14
                : 1150132
                Affiliations
                [1] 1 School of Agricultural Biotechnology, Punjab Agricultural University , Ludhiana, Punjab, India
                [2] 2 Department of Plant Breeding and Genetics, Punjab Agricultural University , Ludhiana, Punjab, India
                [3] 3 International Maize and Wheat Improvement Center (CIMMYT) , Nairobi, Kenya
                Author notes

                Edited by: Nazir Ahmad Khan, University of Agriculture, Peshawar, Pakistan

                Reviewed by: Bernardo Ordas, Spanish National Research Council (CSIC), Spain

                Ivica G. Djalovic, Institute of Field and Vegetable Crops, Serbia

                *Correspondence: Surinder Sandhu, surindersandhu@ 123456pau.edu
                Article
                1150132
                10.3389/fgene.2023.1150132
                10250641
                4944015c-3053-4d9a-8af0-6c497285e0e1
                Copyright © 2023 Karnatam, Mythri, Un Nisa, Sharma, Meena, Rana, Vikal, Gowda, Dhillon and Sandhu.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 23 January 2023
                : 09 May 2023
                Funding
                Authors are thankful for the funding from CGIAR Research Program on Maize (MAIZE), which receives support from the governments of Australia, Belgium, Canada, China, France, India, Japan, Korea, Mexico, Netherlands, New Zealand, Norway, Sweden, Switzerland, United Kingdom, United States; the World Bank; and the Bill & Melinda Gates Foundation, as well as USAID and FFAR project AG2MW (Accelerating Genetic Gains in Maize and Wheat for Improved Livelihoods, B&MGF Investment ID INV-003439).
                Categories
                Genetics
                Review
                Custom metadata
                Genomic Assay Technology

                Genetics
                biomass,silage,digestibility,brown mid-rib,genome-wide association studies,genomic selection
                Genetics
                biomass, silage, digestibility, brown mid-rib, genome-wide association studies, genomic selection

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