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      PAY1 improves plant architecture and enhances grain yield in rice

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          Summary

          Plant architecture, a complex of the important agronomic traits that determine grain yield, is a primary target of artificial selection of rice domestication and improvement. Some important genes affecting plant architecture and grain yield have been isolated and characterized in recent decades; however, their underlying mechanism remains to be elucidated. Here, we report genetic identification and functional analysis of the PLANT ARCHITECTURE AND YIELD 1 ( PAY1 ) gene in rice, which affects plant architecture and grain yield in rice. Transgenic plants over‐expressing PAY1 had twice the number of grains per panicle and consequently produced nearly 38% more grain yield per plant than control plants. Mechanistically, PAY1 could improve plant architecture via affecting polar auxin transport activity and altering endogenous indole‐3‐acetic acid distribution. Furthermore, introgression of PAY1 into elite rice cultivars, using marker‐assisted background selection, dramatically increased grain yield compared with the recipient parents. Overall, these results demonstrated that PAY1 could be a new beneficial genetic resource for shaping ideal plant architecture and breeding high‐yielding rice varieties.

          Significance Statement

          This study describes the identification and functional analysis of the PLANT ARCHITECTURE AND YIELD 1 ( PAY 1) gene in rice, which affects plant architecture and grain yield in rice. PAY 1 can optimize plant architecture through altering auxin polar transport and distribution, leading to more desirable plant architecture and increased grain yield in rice.

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          Most cited references25

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          Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice.

          Yield potential, plant height and heading date are three classes of traits that determine the productivity of many crop plants. Here we show that the quantitative trait locus (QTL) Ghd7, isolated from an elite rice hybrid and encoding a CCT domain protein, has major effects on an array of traits in rice, including number of grains per panicle, plant height and heading date. Enhanced expression of Ghd7 under long-day conditions delays heading and increases plant height and panicle size. Natural mutants with reduced function enable rice to be cultivated in temperate and cooler regions. Thus, Ghd7 has played crucial roles for increasing productivity and adaptability of rice globally.
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            Auxin biosynthesis and its role in plant development.

            Yunde Zhao (2010)
            Indole-3-acetic acid (IAA), the main auxin in higher plants, has profound effects on plant growth and development. Both plants and some plant pathogens can produce IAA to modulate plant growth. Although the genes and biochemical reactions for auxin biosynthesis in some plant pathogens are well understood, elucidation of the mechanisms by which plants produce auxin has proven to be difficult. So far, no single complete pathway of de novo auxin biosynthesis in plants has been firmly established. However, recent studies have led to the discoveries of several genes in tryptophan-dependent auxin biosynthesis pathways. Recent findings have also determined that local auxin biosynthesis plays essential roles in many developmental processes including gametogenesis, embryogenesis, seedling growth, vascular patterning, and flower development. In this review, I summarize the recent advances in dissecting auxin biosynthetic pathways and how the understanding of auxin biosynthesis provides a crucial angle for analyzing the mechanisms of plant development.
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              Genetic and molecular bases of rice yield.

              Grain yield in rice is a complex trait multiplicatively determined by its three component traits: number of panicles, number of grains per panicle, and grain weight; all of which are typical quantitative traits. The developments in genome mapping, sequencing, and functional genomic research have provided powerful tools for investigating the genetic and molecular bases of these quantitative traits. Dissection of the genetic bases of the yield traits based on molecular marker linkage maps resolved hundreds of quantitative trait loci (QTLs) for these traits. Mutant analyses and map-based cloning of QTLs have identified a large number of genes required for the basic processes underlying the initiation and development of tillers and panicles, as well as genes controlling numbers and sizes of grains and panicles. Molecular characterization of these genes has greatly advanced the mechanistic understanding of the regulation of these rice yield traits. These findings have significant implications in crop genetic improvement.
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                Author and article information

                Journal
                Plant J
                Plant J
                10.1111/(ISSN)1365-313X
                TPJ
                The Plant Journal
                John Wiley and Sons Inc. (Hoboken )
                0960-7412
                1365-313X
                07 July 2015
                August 2015
                : 83
                : 3 ( doiID: 10.1111/tpj.2015.83.issue-3 )
                : 528-536
                Affiliations
                [ 1 ] State Key Laboratory of Plant Physiology and Biochemistry National Center for Evaluation of Agricultural Wild Plants (Rice) Beijing Key Laboratory of Crop Genetic Improvement Department of Plant Genetics and BreedingChina Agricultural University Beijing 100193China
                [ 2 ] Hunan Provincial Key Laboratory of PhytohormonesHunan Agricultural University Changsha Hunan 410128China
                [ 3 ] MOE Key Laboratory of Bioinformatics School of Life SciencesTsinghua University Beijing 100084China
                Author notes
                [*] [* ]For correspondence (e‐mail suncq@ 123456cau.edu.cn )
                Article
                TPJ12905
                10.1111/tpj.12905
                4758413
                26095647
                4732653f-bf3b-4bc8-97f2-3235e4d87f81
                © 2015 The Authors The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd.

                This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

                History
                : 07 April 2015
                : 28 May 2015
                : 03 June 2015
                Page count
                Pages: 9
                Funding
                Funded by: National Natural Science Foundation of China
                Award ID: 91335202
                Award ID: 30930057
                Funded by: China National High‐tech Research and Development (‘863’) Program
                Award ID: 2012AA10A301
                Categories
                Original Article
                Original Articles
                Custom metadata
                2.0
                tpj12905
                August 2015
                Converter:WILEY_ML3GV2_TO_NLMPMC version:4.7.6 mode:remove_FC converted:18.02.2016

                Plant science & Botany
                pay1,plant architecture,grain yield,polar auxin transport,rice,oryza sativa
                Plant science & Botany
                pay1, plant architecture, grain yield, polar auxin transport, rice, oryza sativa

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