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      Forest Tree Virome as a Source of Tree Diseases and Biological Control Agents

      , , ,
      Current Forestry Reports
      Springer Science and Business Media LLC

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          Abstract

          Purpose of Review

          The collective virome of forest trees can be considered to include not only plant viruses, but also viral communities harbored by all tree-associated organisms. In this review, we will concentrate on reviewing recent developments in the two fields of forest tree virology that have received the most research input during the last 5 years: (1) current knowledge of virus diseases affecting forest trees and their causal agents and (2) fungal viruses (mycoviruses) and properties that are required for utilizing them for biocontrol purposes.

          Recent Findings

          The discovery of plant and mycoviruses has been revolutionized during the last few years due to high-throughput sequencing (HTS). This has altered our view of virus diversity and prevalence, but also their host ranges, transmission routes, and host effects. Utilization of HTS has greatly expanded our knowledge of plant virus diversity and disease etiology in forest trees and revealed the commonness of cross-kingdom transmission events between fungi, oomycetes, plants, and arthropods. Research on mycoviruses has also identified several new mycoviruses that restrict the growth or virulence of forest pathogenic fungi.

          Summary

          Gaining knowledge of the collective virome of forest ecosystems is essential not only for understanding virus evolution and diversity but also for improving our understanding on virus impacts, and our ability for biocontrol-based and environmentally friendly management of viral and fungal diseases that affect economically important plants and beneficial insects, and for preventing possible disease outbreaks in the future. Virus infections play a central role in plant health, but viral symptoms on forest trees remain often unrecognized and may be confused with other biotic or abiotic damages. However, recent studies have revealed previously unknown viruses as causes of forest tree symptoms and suggest that viruses are responsible for far greater economic losses than recognized earlier. However, many knowledge gaps still need to be filled, particularly on the diversity of viruses that infect different species of forest trees, their irregular distribution within the plant, their mode of transmission, epidemiology and choice of hosts also regarding crop plants, their effect on the metabolism of their host tree, and their interaction with other microorganisms. Mycovirus research has already deciphered detailed information on many critical properties that affect utilizing them for biocontrol purposes. Still, more knowledge is needed concerning mycoviral transmission mode and stability in field conditions, the level of host tolerance against mycoviral infection, and the occurrence of interspecies mycovirus transmission in nature, and safety issues related to these topics.

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          Most cited references146

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          Redefining the invertebrate RNA virosphere

          Current knowledge of RNA virus biodiversity is both biased and fragmentary, reflecting a focus on culturable or disease-causing agents. Here we profile the transcriptomes of over 220 invertebrate species sampled across nine animal phyla and report the discovery of 1,445 RNA viruses, including some that are sufficiently divergent to comprise new families. The identified viruses fill major gaps in the RNA virus phylogeny and reveal an evolutionary history that is characterized by both host switching and co-divergence. The invertebrate virome also reveals remarkable genomic flexibility that includes frequent recombination, lateral gene transfer among viruses and hosts, gene gain and loss, and complex genomic rearrangements. Together, these data present a view of the RNA virosphere that is more phylogenetically and genomically diverse than that depicted in current classification schemes and provide a more solid foundation for studies in virus ecology and evolution.
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            The hologenome concept of evolution after 10 years

            The holobiont (host with its endocellular and extracellular microbiome) can function as a distinct biological entity, an additional organismal level to the ones previously considered, on which natural selection operates. The holobiont can function as a whole: anatomically, metabolically, immunologically, developmentally, and during evolution. Consideration of the holobiont with its hologenome as an independent level of selection in evolution has led to a better understanding of underappreciated modes of genetic variation and evolution. The hologenome is comprised of two complimentary parts: host and microbiome genomes. Changes in either genome can result in variations that can be selected for or against. The host genome is highly conserved, and genetic changes within it occur slowly, whereas the microbiome genome is dynamic and can change rapidly in response to the environment by increasing or reducing particular microbes, by acquisition of novel microbes, by horizontal gene transfer, and by mutation. Recent experiments showing that microbiota can play an initial role in speciation have been suggested as an additional mode of enhancing evolution. Some of the genetic variations can be transferred to offspring by a variety of mechanisms. Strain-specific DNA analysis has shown that at least some of the microbiota can be maintained across hundreds of thousands of host generations, implying the existence of a microbial core. We argue that rapid changes in the microbiome genome could allow holobionts to adapt and survive under changing environmental conditions thus providing the time necessary for the host genome to adapt and evolve. As Darwin wrote, “It is not the strongest of the species that survives but the most adaptable”.
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              Cryphonectria parasitica, the causal agent of chestnut blight: invasion history, population biology and disease control.

              Chestnut blight, caused by Cryphonectria parasitica, is a devastating disease infecting American and European chestnut trees. The pathogen is native to East Asia and was spread to other continents via infected chestnut plants. This review summarizes the current state of research on this pathogen with a special emphasis on its interaction with a hyperparasitic mycovirus that acts as a biological control agent of chestnut blight.
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                Author and article information

                Journal
                Current Forestry Reports
                Curr. For. Rep.
                Springer Science and Business Media LLC
                2198-6436
                June 2024
                February 21 2024
                : 10
                : 3
                : 153-174
                Article
                10.1007/s40725-024-00214-8
                4339e9e2-7329-4535-b057-6f42b3d58413
                © 2024

                https://creativecommons.org/licenses/by/4.0

                https://creativecommons.org/licenses/by/4.0

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