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      Autophagy, mitochondria and oxidative stress: cross-talk and redox signalling

      review-article
      * , , * , , * , , , 2
      Biochemical Journal
      Portland Press Ltd.
      autophagy, mitochondrion, neurodegeneration, nitrative stress, oxidative stress, redox signalling, ALS, amyotrophic lateral sclerosis, AMPK, 5′-AMP-activated protein kinase, ATG, AuTophaGy-related, BAG, Bcl-2-associated athanogene, BNIP, Bcl-2/adenovirus E18 19-kDa-interacting protein, BNIP3L, BNIP3-like, Drp1, dynamin-related protein 1, ECH, enoyl-CoA hydratase, EM, electron microscopy, ER, endoplasmic reticulum, FIP200, focal adhesion kinase family-interacting protein of 200 kDa, GABARAP, GABAA (γ-aminobutyric acid type A)-receptor-associated protein, GFP, green fluorescent protein, HIF-1, hypoxia-inducible factor 1, HNE, 4-hydroxynonenal, IκB, inhibitor of nuclear factor κB, IKKβ, IκB kinase β, IP3, inositol 1,4,5-trisphosphate, JNK1, c-Jun N-terminal kinase 1, Keap1, Kelch-like ECH-associated protein 1, LAMP, lysosome-associated membrane protein, LC3, light chain 3, LRRK2, leucine-rich repeat kinase 2, 3-MA, 3-methyladenine, mETC, mitochondrial electron-transport chain, mtDNA, mitochondrial DNA, mTOR, mammalian target of rapamycin, NAC, N-acetyl-L-cysteine, NBR1, neighbour of BRCA1 (breast cancer early-onset 1), NF-κB, nuclear factor κB, NGF, nerve growth factor, NOS, nitric oxide synthase, NOX, NADPH oxidase, Nrf2, nuclear factor-erythroid 2-related factor 2, PE, phosphatidylethanolamine, PI3K, phosphoinositide 3-kinase, PI3P, phosphatidylinositol 3-phosphate, PINK1, PTEN (phosphatase and tensin homologue deleted on chromosome 10)-induced kinase 1 , RFP, red fluorescent protein, RLS, reactive lipid species, RNS, reactive nitrogen species, ROS, reactive oxygen species, Rubicon, RUN domain- and cysteine-rich domain-containing beclin-1-interacting protein, siRNA, small interfering RNA, SOD, superoxide dismutase, TAC, transverse aortic constriction, tfLC3, tandem fluorescently tagged LC3, TIGAR, TP53 (tumour protein 53)-induced glycolysis and apoptosis regulator, TNFα, tumour necrosis factor α, TOR, target of rapamycin, Tzb, trastuzumab, UCP, uncoupling protein, ULK, unc (unco-ordinated family member)-51-like kinase, VDAC, voltage-dependent anion channel, Vps34, vacuolar protein sorting 34

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          Abstract

          Reactive oxygen and nitrogen species change cellular responses through diverse mechanisms that are now being defined. At low levels, they are signalling molecules, and at high levels, they damage organelles, particularly the mitochondria. Oxidative damage and the associated mitochondrial dysfunction may result in energy depletion, accumulation of cytotoxic mediators and cell death. Understanding the interface between stress adaptation and cell death then is important for understanding redox biology and disease pathogenesis. Recent studies have found that one major sensor of redox signalling at this switch in cellular responses is autophagy. Autophagic activities are mediated by a complex molecular machinery including more than 30 Atg (AuTophaGy-related) proteins and 50 lysosomal hydrolases. Autophagosomes form membrane structures, sequester damaged, oxidized or dysfunctional intracellular components and organelles, and direct them to the lysosomes for degradation. This autophagic process is the sole known mechanism for mitochondrial turnover. It has been speculated that dysfunction of autophagy may result in abnormal mitochondrial function and oxidative or nitrative stress. Emerging investigations have provided new understanding of how autophagy of mitochondria (also known as mitophagy) is controlled, and the impact of autophagic dysfunction on cellular oxidative stress. The present review highlights recent studies on redox signalling in the regulation of autophagy, in the context of the basic mechanisms of mitophagy. Furthermore, we discuss the impact of autophagy on mitochondrial function and accumulation of reactive species. This is particularly relevant to degenerative diseases in which oxidative stress occurs over time, and dysfunction in both the mitochondrial and autophagic pathways play a role.

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          Most cited references225

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          TIGAR, a p53-Inducible Regulator of Glycolysis and Apoptosis

          The p53 tumor-suppressor protein prevents cancer development through various mechanisms, including the induction of cell-cycle arrest, apoptosis, and the maintenance of genome stability. We have identified a p53-inducible gene named TIGAR (TP53-induced glycolysis and apoptosis regulator). TIGAR expression lowered fructose-2,6-bisphosphate levels in cells, resulting in an inhibition of glycolysis and an overall decrease in intracellular reactive oxygen species (ROS) levels. These functions of TIGAR correlated with an ability to protect cells from ROS-associated apoptosis, and consequently, knockdown of endogenous TIGAR expression sensitized cells to p53-induced death. Expression of TIGAR may therefore modulate the apoptotic response to p53, allowing survival in the face of mild or transient stress signals that may be reversed or repaired. The decrease of intracellular ROS levels in response to TIGAR may also play a role in the ability of p53 to protect from the accumulation of genomic damage.
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            Motor neuron degeneration in mice that express a human Cu,Zn superoxide dismutase mutation.

            Mutations of human Cu,Zn superoxide dismutase (SOD) are found in about 20 percent of patients with familial amyotrophic lateral sclerosis (ALS). Expression of high levels of human SOD containing a substitution of glycine to alanine at position 93--a change that has little effect on enzyme activity--caused motor neuron disease in transgenic mice. The mice became paralyzed in one or more limbs as a result of motor neuron loss from the spinal cord and died by 5 to 6 months of age. The results show that dominant, gain-of-function mutations in SOD contribute to the pathogenesis of familial ALS.
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              Nix is a selective autophagy receptor for mitochondrial clearance.

              Autophagy is the cellular homeostatic pathway that delivers large cytosolic materials for degradation in the lysosome. Recent evidence indicates that autophagy mediates selective removal of protein aggregates, organelles and microbes in cells. Yet, the specificity in targeting a particular substrate to the autophagy pathway remains poorly understood. Here, we show that the mitochondrial protein Nix is a selective autophagy receptor by binding to LC3/GABARAP proteins, ubiquitin-like modifiers that are required for the growth of autophagosomal membranes. In cultured cells, Nix recruits GABARAP-L1 to damaged mitochondria through its amino-terminal LC3-interacting region. Furthermore, ablation of the Nix:LC3/GABARAP interaction retards mitochondrial clearance in maturing murine reticulocytes. Thus, Nix functions as an autophagy receptor, which mediates mitochondrial clearance after mitochondrial damage and during erythrocyte differentiation.
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                Author and article information

                Journal
                Biochem J
                bic
                BJ
                Biochemical Journal
                Portland Press Ltd.
                0264-6021
                1470-8728
                21 December 2011
                15 January 2012
                : 441
                : Pt 2
                : 523-540
                Affiliations
                *Center for Free Radical Biology, University of Alabama at Birmingham, 901 19th Street South, Birmingham, AL 35294, U.S.A.
                †Department of Pathology, University of Alabama at Birmingham, 901 19th Street South, Birmingham, AL 35294, U.S.A.
                ‡Department of Veterans Affairs, Birmingham VA Medical Center, 700 South 19th Street, Birmingham, AL 35233, U.S.A.
                Author notes

                1These authors are joint first authors.

                2To whom correspondence should be addressed (email zhanja@ 123456uab.edu ).
                Article
                BJ20111451
                10.1042/BJ20111451
                3258656
                22187934
                3e767d20-fac9-4ec5-84e4-b0f5cdc9ea3b
                © 2012 The Author(s) The author(s) has paid for this article to be freely available under the terms of the Creative Commons Attribution Non-Commercial Licence (http://creativecommons.org/licenses/by-nc/2.5/) which permits unrestricted non-commercial use, distribution and reproduction in any medium, provided the original work is properly cited.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 8 August 2011
                : 25 August 2011
                : 5 September 2011
                Page count
                Figures: 3, Tables: 1, References: 291, Pages: 18
                Categories
                Review Article

                Biochemistry
                vdac, voltage-dependent anion channel,autophagy,tzb, trastuzumab,ros, reactive oxygen species,hif-1, hypoxia-inducible factor 1,tor, target of rapamycin,tnfα, tumour necrosis factor α,nos, nitric oxide synthase,nac, n-acetyl-l-cysteine,sod, superoxide dismutase,drp1, dynamin-related protein 1,rfp, red fluorescent protein,pe, phosphatidylethanolamine,ikkβ, iκb kinase β,pi3k, phosphoinositide 3-kinase,nitrative stress,lc3, light chain 3,ech, enoyl-coa hydratase,em, electron microscopy,lamp, lysosome-associated membrane protein,pi3p, phosphatidylinositol 3-phosphate,nbr1, neighbour of brca1 (breast cancer early-onset 1),nrf2, nuclear factor-erythroid 2-related factor 2,bag, bcl-2-associated athanogene,bnip, bcl-2/adenovirus e18 19-kda-interacting protein,keap1, kelch-like ech-associated protein 1,redox signalling,mitochondrion,jnk1, c-jun n-terminal kinase 1,hne, 4-hydroxynonenal,gfp, green fluorescent protein,nf-κb, nuclear factor κb,tigar, tp53 (tumour protein 53)-induced glycolysis and apoptosis regulator,nox, nadph oxidase,ulk, unc (unco-ordinated family member)-51-like kinase,gabarap, gabaa (γ-aminobutyric acid type a)-receptor-associated protein,oxidative stress,ip3, inositol 1,4,5-trisphosphate,vps34, vacuolar protein sorting 34,fip200, focal adhesion kinase family-interacting protein of 200 kda,ngf, nerve growth factor,tflc3, tandem fluorescently tagged lc3,tac, transverse aortic constriction,pink1, pten (phosphatase and tensin homologue deleted on chromosome 10)-induced kinase 1,ampk, 5′-amp-activated protein kinase,sirna, small interfering rna,ucp, uncoupling protein,metc, mitochondrial electron-transport chain,mtdna, mitochondrial dna,neurodegeneration,rls, reactive lipid species,rubicon, run domain- and cysteine-rich domain-containing beclin-1-interacting protein,als, amyotrophic lateral sclerosis,3-ma, 3-methyladenine,rns, reactive nitrogen species,iκb, inhibitor of nuclear factor κb,mtor, mammalian target of rapamycin,atg, autophagy-related,er, endoplasmic reticulum,bnip3l, bnip3-like,lrrk2, leucine-rich repeat kinase 2
                Biochemistry
                vdac, voltage-dependent anion channel, autophagy, tzb, trastuzumab, ros, reactive oxygen species, hif-1, hypoxia-inducible factor 1, tor, target of rapamycin, tnfα, tumour necrosis factor α, nos, nitric oxide synthase, nac, n-acetyl-l-cysteine, sod, superoxide dismutase, drp1, dynamin-related protein 1, rfp, red fluorescent protein, pe, phosphatidylethanolamine, ikkβ, iκb kinase β, pi3k, phosphoinositide 3-kinase, nitrative stress, lc3, light chain 3, ech, enoyl-coa hydratase, em, electron microscopy, lamp, lysosome-associated membrane protein, pi3p, phosphatidylinositol 3-phosphate, nbr1, neighbour of brca1 (breast cancer early-onset 1), nrf2, nuclear factor-erythroid 2-related factor 2, bag, bcl-2-associated athanogene, bnip, bcl-2/adenovirus e18 19-kda-interacting protein, keap1, kelch-like ech-associated protein 1, redox signalling, mitochondrion, jnk1, c-jun n-terminal kinase 1, hne, 4-hydroxynonenal, gfp, green fluorescent protein, nf-κb, nuclear factor κb, tigar, tp53 (tumour protein 53)-induced glycolysis and apoptosis regulator, nox, nadph oxidase, ulk, unc (unco-ordinated family member)-51-like kinase, gabarap, gabaa (γ-aminobutyric acid type a)-receptor-associated protein, oxidative stress, ip3, inositol 1,4,5-trisphosphate, vps34, vacuolar protein sorting 34, fip200, focal adhesion kinase family-interacting protein of 200 kda, ngf, nerve growth factor, tflc3, tandem fluorescently tagged lc3, tac, transverse aortic constriction, pink1, pten (phosphatase and tensin homologue deleted on chromosome 10)-induced kinase 1, ampk, 5′-amp-activated protein kinase, sirna, small interfering rna, ucp, uncoupling protein, metc, mitochondrial electron-transport chain, mtdna, mitochondrial dna, neurodegeneration, rls, reactive lipid species, rubicon, run domain- and cysteine-rich domain-containing beclin-1-interacting protein, als, amyotrophic lateral sclerosis, 3-ma, 3-methyladenine, rns, reactive nitrogen species, iκb, inhibitor of nuclear factor κb, mtor, mammalian target of rapamycin, atg, autophagy-related, er, endoplasmic reticulum, bnip3l, bnip3-like, lrrk2, leucine-rich repeat kinase 2

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