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      Integrating Multi-Sensors Data for Species Distribution Mapping Using Deep Learning and Envelope Models

      , , , ,
      Remote Sensing
      MDPI AG

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          Abstract

          The integration of ecological and atmospheric characteristics for biodiversity management is fundamental for long-term ecosystem conservation and drafting forest management strategies, especially in the current era of climate change. The explicit modelling of regional ecological responses and their impact on individual species is a significant prerequisite for any adaptation strategy. The present study focuses on predicting the regional distribution of Rhododendron arboreum, a medicinal plant species found in the Himalayan region. Advanced Species Distribution Models (SDM) based on the principle of predefined hypothesis, namely BIOCLIM, was used to model the potential distribution of Rhododendron arboreum. This hypothesis tends to vary with the change in locations, and thus, robust models are required to establish nonlinear complex relations between the input parameters. To address this nonlinear relation, a class of deep neural networks, Convolutional Neural Network (CNN) architecture is proposed, designed, and tested, which eventually gave much better accuracy than the BIOCLIM model. Both of the models were given 16 input parameters, including ecological and atmospheric variables, which were statistically resampled and were then utilized in establishing the linear and nonlinear relationship to better fit the occurrence scenarios of the species. The input parameters were mostly acquired from the recent satellite missions, including MODIS, Sentinel-2, Sentinel-5p, the Shuttle Radar Topography Mission (SRTM), and ECOSTRESS. The performance across all the thresholds was evaluated using the value of the Area Under Curve (AUC) evaluation metrics. The AUC value was found to be 0.917 with CNN, whereas it was 0.68 with BIOCLIM, respectively. The performance evaluation metrics indicate the superiority of CNN for species distribution over BIOCLIM.

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          The meaning and use of the area under a receiver operating characteristic (ROC) curve.

          A representation and interpretation of the area under a receiver operating characteristic (ROC) curve obtained by the "rating" method, or by mathematical predictions based on patient characteristics, is presented. It is shown that in such a setting the area represents the probability that a randomly chosen diseased subject is (correctly) rated or ranked with greater suspicion than a randomly chosen non-diseased subject. Moreover, this probability of a correct ranking is the same quantity that is estimated by the already well-studied nonparametric Wilcoxon statistic. These two relationships are exploited to (a) provide rapid closed-form expressions for the approximate magnitude of the sampling variability, i.e., standard error that one uses to accompany the area under a smoothed ROC curve, (b) guide in determining the size of the sample required to provide a sufficiently reliable estimate of this area, and (c) determine how large sample sizes should be to ensure that one can statistically detect differences in the accuracy of diagnostic techniques.
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            Deep learning in neural networks: An overview

            In recent years, deep artificial neural networks (including recurrent ones) have won numerous contests in pattern recognition and machine learning. This historical survey compactly summarizes relevant work, much of it from the previous millennium. Shallow and Deep Learners are distinguished by the depth of their credit assignment paths, which are chains of possibly learnable, causal links between actions and effects. I review deep supervised learning (also recapitulating the history of backpropagation), unsupervised learning, reinforcement learning & evolutionary computation, and indirect search for short programs encoding deep and large networks.
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              Maximum entropy modeling of species geographic distributions

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                Author and article information

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                Journal
                Remote Sensing
                Remote Sensing
                MDPI AG
                2072-4292
                August 2021
                August 19 2021
                : 13
                : 16
                : 3284
                Article
                10.3390/rs13163284
                397e4bf0-086f-4e4a-a40b-c7dcf9a0c58c
                © 2021

                https://creativecommons.org/licenses/by/4.0/

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