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       Desmopsisterriflora, an extraordinary new species of Annonaceae with flagelliflory

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          Abstract

          Flagelliflory refers to the production of inflorescences exclusively on long, whip-like branches which emerge from the main trunk and extend along the ground or below it. It is the rarest type of cauliflory and only a few cases have been reported in the world. Here, a new species of Annonaceae with flagelliflory is described and illustrated. The phylogenetic relationships of the new species were inferred using a hybrid-capture phylogenomic approach and we present some notes on its reproductive ecology and pollen characteristics. The new species, namely Desmopsis terriflora sp. nov., is part of a clade composed of Mexican species of Stenanona with long, awned petals. Desmopsis terriflora is distinguished by its flageliflorous inflorescences, basely fused sepals, thick red petals, reduced number of ovules per carpel, pollen grains with a weakly rugulate to fossulate exine ornamentation, and its globose, apiculate fruits with a woody testa. The morphological characteristics of the flagella suggest that these are specialized branches rather than inflorescences, and the absence of ramiflory implies an exclusively reproductive function. The flowers are infrequently visited by insects, their potential pollinators being flies and ants.

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          RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

          Motivation: Phylogenies are increasingly used in all fields of medical and biological research. Moreover, because of the next-generation sequencing revolution, datasets used for conducting phylogenetic analyses grow at an unprecedented pace. RAxML (Randomized Axelerated Maximum Likelihood) is a popular program for phylogenetic analyses of large datasets under maximum likelihood. Since the last RAxML paper in 2006, it has been continuously maintained and extended to accommodate the increasingly growing input datasets and to serve the needs of the user community. Results: I present some of the most notable new features and extensions of RAxML, such as a substantial extension of substitution models and supported data types, the introduction of SSE3, AVX and AVX2 vector intrinsics, techniques for reducing the memory requirements of the code and a plethora of operations for conducting post-analyses on sets of trees. In addition, an up-to-date 50-page user manual covering all new RAxML options is available. Availability and implementation: The code is available under GNU GPL at https://github.com/stamatak/standard-RAxML. Contact: alexandros.stamatakis@h-its.org Supplementary information: Supplementary data are available at Bioinformatics online.
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            Regression Analysis of Count Data

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              ASTRAL-III: Increased Scalability and Impacts of Contracting Low Support Branches

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                Author and article information

                Contributors
                Journal
                PhytoKeys
                PhytoKeys
                3
                urn:lsid:arphahub.com:pub:F7FCE910-8E78-573F-9C77-7788555F8AAD
                urn:lsid:zoobank.org:pub:66878968-5FA3-48E4-A0CA-743FBBB0315D
                PhytoKeys
                Pensoft Publishers
                1314-2011
                1314-2003
                2023
                23 June 2023
                : 227
                : 181-198
                Affiliations
                [1 ] Posgrado en Ciencias biológicas, Universidad Nacional Autónoma de México (UNAM), Ciudad de México, Mexico
                [2 ] Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México (UNAM), Ciudad de México, Mexico
                [3 ] Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum National d‘Histoire Naturelle-CNRS-SU-EPHE-UA, Paris, France
                [4 ] DIADE, Université de Montpellier, CIRAD, IRD, Montpellier, France
                [5 ] Missouri Botanical Garden, P.O. Box 299, St. Louis, MO 63166-0299, USA
                Author notes
                Corresponding author: Andrés Ernesto Ortiz-Rodriguez ( andres.ortiz@ 123456ib.unam.mx)

                Academic editor: M. Alejandra Jaramillo

                Author information
                https://orcid.org/0000-0001-9022-9658
                https://orcid.org/0000-0002-4263-3573
                https://orcid.org/0009-0001-3910-2317
                https://orcid.org/0000-0002-0361-8709
                https://orcid.org/0000-0002-8509-6587
                https://orcid.org/0000-0003-4583-6701
                Article
                102279
                10.3897/phytokeys.227.102279
                10314296
                3813cc5e-99c0-4041-9dc7-dfda1f75add7
                María Fernanda Martínez-Velarde, Carlos Rodrigues-Vaz, Vincent Soulé, Francis J. Nge, George E. Schatz, Thomas L. P. Couvreur, Andrés Ernesto Ortiz-Rodriguez

                This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 17 February 2023
                : 03 May 2023
                Categories
                Research Article
                Annonaceae
                Magnoliales
                Biodiversity & Conservation
                Bioinformatics
                Floristics & Distribution
                Molecular systematics
                Phylogeny
                Taxonomy
                Americas
                Central America and the Caribbean

                Plant science & Botany
                anatomy,cauliflory,mexico,phylogeny,tropical rain forest
                Plant science & Botany
                anatomy, cauliflory, mexico, phylogeny, tropical rain forest

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