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      The Drosophila homologue of CTIP1 (Bcl11a) and CTIP2 (Bcl11b) regulates neural stem cell temporal patterning

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          ABSTRACT

          In the developing nervous system, neural stem cells (NSCs) use temporal patterning to generate a wide variety of different neuronal subtypes. In Drosophila, the temporal transcription factors, Hunchback, Kruppel, Pdm and Castor, are sequentially expressed by NSCs to regulate temporal identity during neurogenesis. Here, we identify a new temporal transcription factor that regulates the transition from the Pdm to Castor temporal windows. This factor, which we call Chronophage (or ‘time-eater’), is homologous to mammalian CTIP1 (Bcl11a) and CTIP2 (Bcl11b). We show that Chronophage binds upstream of the castor gene and regulates its expression. Consistent with Chronophage promoting a temporal switch, chronophage mutants generate an excess of Pdm-specified neurons and are delayed in generating neurons associated with the Castor temporal window. In addition to promoting the Pdm to Castor transition, Chronophage also represses the production of neurons generated during the earlier Hunchback and Kruppel temporal windows. Genetic interactions with Hunchback and Kruppel indicate that Chronophage regulates NSC competence to generate Hunchback- and Kruppel-specified neurons. Taken together, our results suggest that Chronophage has a conserved role in temporal patterning and neuronal subtype specification.

          Abstract

          Summary: The Drosophila CTIP1/2 (Bcl11a/b) homologue chronophage regulates the temporal cascade and neural stem cell competence in the embryonic central nervous system.

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          Enzymatic assembly of DNA molecules up to several hundred kilobases.

          We describe an isothermal, single-reaction method for assembling multiple overlapping DNA molecules by the concerted action of a 5' exonuclease, a DNA polymerase and a DNA ligase. First we recessed DNA fragments, yielding single-stranded DNA overhangs that specifically annealed, and then covalently joined them. This assembly method can be used to seamlessly construct synthetic and natural genes, genetic pathways and entire genomes, and could be a useful molecular engineering tool.
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            An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases.

            Germ-line transformation via transposable elements is a powerful tool to study gene function in Drosophila melanogaster. However, some inherent characteristics of transposon-mediated transgenesis limit its use for transgene analysis. Here, we circumvent these limitations by optimizing a phiC31-based integration system. We generated a collection of lines with precisely mapped attP sites that allow the insertion of transgenes into many different predetermined intergenic locations throughout the fly genome. By using regulatory elements of the nanos and vasa genes, we established endogenous sources of the phiC31 integrase, eliminating the difficulties of coinjecting integrase mRNA and raising the transformation efficiency. Moreover, to discriminate between specific and rare nonspecific integration events, a white gene-based reconstitution system was generated that enables visual selection for precise attP targeting. Finally, we demonstrate that our chromosomal attP sites can be modified in situ, extending their scope while retaining their properties as landing sites. The efficiency, ease-of-use, and versatility obtained here with the phiC31-based integration system represents an important advance in transgenesis and opens up the possibility of systematic, high-throughput screening of large cDNA sets and regulatory elements.
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              Neuronal subtype specification in the cerebral cortex.

              In recent years, tremendous progress has been made in understanding the mechanisms underlying the specification of projection neurons within the mammalian neocortex. New experimental approaches have made it possible to identify progenitors and study the lineage relationships of different neocortical projection neurons. An expanding set of genes with layer and neuronal subtype specificity have been identified within the neocortex, and their function during projection neuron development is starting to be elucidated. Here, we assess recent data regarding the nature of neocortical progenitors, review the roles of individual genes in projection neuron specification and discuss the implications for progenitor plasticity.
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                Author and article information

                Journal
                Development
                Development
                DEV
                develop
                Development (Cambridge, England)
                The Company of Biologists Ltd
                0950-1991
                1477-9129
                1 September 2022
                7 September 2022
                7 September 2022
                : 149
                : 17
                : dev200677
                Affiliations
                The Gurdon Institute and Department of Physiology, Development and Neuroscience, University of Cambridge , Tennis Court Road, Cambridge CB2 1QN, UK
                Author notes
                [*]

                Present address: AbbVie, Cruce Dávila, Barceloneta, PR 00652, USA.

                []Author for correspondence ( a.brand@ 123456gurdon.cam.ac.uk )

                Handling Editor: James Briscoe

                Author information
                http://orcid.org/0000-0002-5626-9637
                http://orcid.org/0000-0002-1110-3860
                http://orcid.org/0000-0002-2089-6954
                Article
                DEV200677
                10.1242/dev.200677
                9482335
                36069896
                329a05ca-d2d8-4f08-bb31-24024a0932b6
                © 2022. Published by The Company of Biologists Ltd

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( https://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed.

                History
                : 22 February 2022
                : 3 August 2022
                Funding
                Funded by: European Molecular Biology Organization, http://dx.doi.org/10.13039/100004410;
                Funded by: Wellcome Trust, http://dx.doi.org/10.13039/100010269;
                Award ID: 203798
                Award ID: 103792/Z/14/Z
                Award ID: 092545
                Funded by: Royal Society, http://dx.doi.org/10.13039/501100000288;
                Award ID: RP150061
                Funded by: University of Cambridge, http://dx.doi.org/10.13039/501100000735;
                Categories
                Stem Cells & Regeneration
                Stem Cells and Regeneration

                Developmental biology
                temporal patterning,neural development,neural stem cells,chronophage,ctip1/2,bcl11a,bcl11b

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