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      DIPG-like MYB-altered diffuse astrocytoma with durable response to intensive chemotherapy

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          Abstract

          Pontine gliomas represent difficult to treat entity due to the location and heterogeneous biology varying from indolent low-grade gliomas to aggressive diffuse intrinsic pontine glioma (DIPG). Making the correct tumor diagnosis in the pontine location is thus critical. Here, we report a case study of a 14-month-old patient initially diagnosed as histone H3 wild-type DIPG. Due to the low age of the patient, the MRI appearance of DIPG, and anaplastic astrocytoma histology, intensive chemotherapy based on the HIT-SKK protocol with vinblastine maintenance chemotherapy was administered. Rapid clinical improvement and radiological regression of the tumor were observed with nearly complete remission with durable effect and excellent clinical condition more than 6.5 years after diagnosis. Based on this unexpected therapeutic outcome, genome-wide DNA methylation array was employed and the sample was classified into the methylation class “Low-grade glioma, MYB(L1) altered.” Additionally, RT-PCR revealed the presence of MYB::QKI fusion. Taken together, the histopathological classification, molecular-genetic and epigenetic features, clinical behavior, and pontine location have led us to reclassify the tumor as a pontine MYB-altered glioma. Our case demonstrates that more intensive chemotherapy can achieve long-term clinical effect in the treatment of MYB-altered pontine gliomas compared to previously used LGG-based regimens or radiotherapy. It also emphasizes the importance of a biopsy and a thorough molecular investigation of pontine lesions.

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          Most cited references17

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          The 2007 WHO Classification of Tumours of the Central Nervous System

          The fourth edition of the World Health Organization (WHO) classification of tumours of the central nervous system, published in 2007, lists several new entities, including angiocentric glioma, papillary glioneuronal tumour, rosette-forming glioneuronal tumour of the fourth ventricle, papillary tumour of the pineal region, pituicytoma and spindle cell oncocytoma of the adenohypophysis. Histological variants were added if there was evidence of a different age distribution, location, genetic profile or clinical behaviour; these included pilomyxoid astrocytoma, anaplastic medulloblastoma and medulloblastoma with extensive nodularity. The WHO grading scheme and the sections on genetic profiles were updated and the rhabdoid tumour predisposition syndrome was added to the list of familial tumour syndromes typically involving the nervous system. As in the previous, 2000 edition of the WHO ‘Blue Book’, the classification is accompanied by a concise commentary on clinico-pathological characteristics of each tumour type. The 2007 WHO classification is based on the consensus of an international Working Group of 25 pathologists and geneticists, as well as contributions from more than 70 international experts overall, and is presented as the standard for the definition of brain tumours to the clinical oncology and cancer research communities world-wide.
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            DNA methylation-based classification of central nervous system tumours

            Summary Accurate pathological diagnosis is crucial for optimal management of cancer patients. For the ~100 known central nervous system (CNS) tumour entities, standardization of the diagnostic process has been shown to be particularly challenging - with substantial inter-observer variability in the histopathological diagnosis of many tumour types. We herein present the development of a comprehensive approach for DNA methylation-based CNS tumour classification across all entities and age groups, and demonstrate its application in a routine diagnostic setting. We show that availability of this method may have substantial impact on diagnostic precision compared with standard methods, resulting in a change of diagnosis in up to 12% of prospective cases. For broader accessibility we have designed a free online classifier tool (www.molecularneuropathology.org) requiring no additional onsite data processing. Our results provide a blueprint for the generation of machine learning-based tumour classifiers across other cancer entities, with the potential to fundamentally transform tumour pathology.
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              Histone H3F3A and HIST1H3B K27M mutations define two subgroups of diffuse intrinsic pontine gliomas with different prognosis and phenotypes

              Diffuse intrinsic pontine glioma (DIPG) is the most severe paediatric solid tumour, with no significant therapeutic progress made in the past 50 years. Recent studies suggest that diffuse midline glioma, H3-K27M mutant, may comprise more than one biological entity. The aim of the study was to determine the clinical and biological variables that most impact their prognosis. Ninety-one patients with classically defined DIPG underwent a systematic stereotactic biopsy and were included in this observational retrospective study. Histone H3 genes mutations were assessed by immunochemistry and direct sequencing, whilst global gene expression profiling and chromosomal imbalances were determined by microarrays. A full description of the MRI findings at diagnosis and at relapse was integrated with the molecular profiling data and clinical outcome. All DIPG but one were found to harbour either a somatic H3-K27M mutation and/or loss of H3K27 trimethylation. We also discovered a novel K27M mutation in HIST2H3C, and a lysine-to-isoleucine substitution (K27I) in H3F3A, also creating a loss of trimethylation. Patients with tumours harbouring a K27M mutation in H3.3 (H3F3A) did not respond clinically to radiotherapy as well, relapsed significantly earlier and exhibited more metastatic recurrences than those in H3.1 (HIST1H3B/C). H3.3-K27M-mutated DIPG have a proneural/oligodendroglial phenotype and a pro-metastatic gene expression signature with PDGFRA activation, while H3.1-K27M-mutated tumours exhibit a mesenchymal/astrocytic phenotype and a pro-angiogenic/hypoxic signature supported by expression profiling and radiological findings. H3K27 alterations appear as the founding event in DIPG and the mutations in the two main histone H3 variants drive two distinct oncogenic programmes with potential specific therapeutic targets. Electronic supplementary material The online version of this article (doi:10.1007/s00401-015-1478-0) contains supplementary material, which is available to authorized users.
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                Author and article information

                Contributors
                michal.zapotocky@fnmotol.cz
                Journal
                Childs Nerv Syst
                Childs Nerv Syst
                Child's Nervous System
                Springer Berlin Heidelberg (Berlin/Heidelberg )
                0256-7040
                1433-0350
                11 May 2023
                11 May 2023
                2023
                : 39
                : 9
                : 2509-2513
                Affiliations
                [1 ]GRID grid.412826.b, ISNI 0000 0004 0611 0905, Prague Brain Tumor Research Group, Second Faculty of Medicine, , Charles University and University Hospital Motol, ; V Uvalu 84, 15006 Prague 5, Czech Republic
                [2 ]GRID grid.412826.b, ISNI 0000 0004 0611 0905, Pediatric Neurooncology Centre, , University Hospital Motol, ; V Uvalu 84, 15006 Prague 5, Czech Republic
                [3 ]GRID grid.4491.8, ISNI 0000 0004 1937 116X, Department of Pediatric Hematology and Oncology, Second Faculty of Medicine, , Charles University Prague and University Hospital Motol, ; V Uvalu 84, 15006 Prague 5, Czech Republic
                [4 ]GRID grid.4491.8, ISNI 0000 0004 1937 116X, Department of Pathology and Molecular Medicine, Second Faculty of Medicine, , Charles University Prague and University Hospital Motol, ; V Uvalu 84, 15006 Prague 5, Czech Republic
                [5 ]GRID grid.412694.c, ISNI 0000 0000 8875 8983, Department of Pediatrics, , University Hospital in Pilsen, ; Alej Svobody 80, Pilsen-Lochotin, 323 00 Czech Republic
                [6 ]GRID grid.412694.c, ISNI 0000 0000 8875 8983, Department of Neurosurgery, , University Hospital in Pilsen, ; Alej Svobody 80, Pilsen-Lochotin, 323 00 Czech Republic
                Article
                5976
                10.1007/s00381-023-05976-3
                10432314
                37165121
                30ae69ef-ea13-4cc0-b5b6-cf2259449b2e
                © The Author(s) 2023

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 28 February 2023
                : 29 April 2023
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/100007543, Grantová Agentura, Univerzita Karlova;
                Award ID: 204220
                Award ID: PRIMUS/19/MED/06
                Award ID: 204220
                Award Recipient :
                Funded by: The project National Institute for Cancer Research (Programme EXCELES)
                Award ID: LX22NPO5102
                Award ID: LX22NPO5102
                Award ID: LX22NPO5102
                Award Recipient :
                Funded by: University Hospital Motol
                Award ID: MH CZ–DRO,00064203
                Award ID: MH CZ–DRO,00064203
                Award ID: MH CZ–DRO,00064203
                Award ID: MH CZ–DRO,00064203
                Award Recipient :
                Funded by: Charles University
                Categories
                Case Report
                Custom metadata
                © Springer-Verlag GmbH Germany, part of Springer Nature 2023

                Neurology
                myb-altered glioma,myb::qki fusion,pediatric pontine glioma,dipg,chemotherapy
                Neurology
                myb-altered glioma, myb::qki fusion, pediatric pontine glioma, dipg, chemotherapy

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