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      TFG facilitates outer coat disassembly on COPII transport carriers to promote tethering and fusion with ER–Golgi intermediate compartments

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          The endoplasmic reticulum (ER) serves as a platform for the packaging of most secretory proteins into conserved coat protein complex II (COPII)-coated transport carriers destined for ER–Golgi intermediate compartments (ERGIC) in animal cells. In this work, we demonstrate that Trk-fused gene (TFG), a protein implicated in multiple neurodegenerative diseases and oncogenesis, functions in this pathway by interacting directly with the COPII protein Sec23. Specifically, we show that TFG outcompetes interactions between the inner and outer layers of the COPII coat, indicating that TFG promotes the uncoating process after transport carriers undergo scission from the ER. Moreover, we demonstrate that TFG simultaneously captures and concentrates COPII transport carriers at the ER/ERGIC interface to enable the rapid movement of secretory cargoes to the ERGIC.

          Abstract

          The conserved coat protein complex II (COPII) mediates the initial steps of secretory protein trafficking by assembling onto subdomains of the endoplasmic reticulum (ER) in two layers to generate cargo-laden transport carriers that ultimately fuse with an adjacent ER–Golgi intermediate compartment (ERGIC). Here, we demonstrate that Trk-fused gene (TFG) binds directly to the inner layer of the COPII coat. Specifically, the TFG C terminus interacts with Sec23 through a shared interface with the outer COPII coat and the cargo receptor Tango1/cTAGE5. Our findings indicate that TFG binding to Sec23 outcompetes these other associations in a concentration-dependent manner and ultimately promotes outer coat dissociation. Additionally, we demonstrate that TFG tethers vesicles harboring the inner COPII coat, which contributes to their clustering between the ER and ERGIC in cells. Together, our studies define a mechanism by which COPII transport carriers are retained locally at the ER/ERGIC interface after outer coat disassembly, which is a prerequisite for fusion with ERGIC membranes.

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          Most cited references86

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          COPII: a membrane coat formed by Sec proteins that drive vesicle budding from the endoplasmic reticulum.

          In vitro synthesis of endoplasmic reticulum-derived transport vesicles has been reconstituted with washed membranes and three soluble proteins (Sar1p, Sec13p complex, and Sec23p complex). Vesicle formation requires GTP but can be driven by nonhydrolyzable analogs such as GMP-PNP. However, GMP-PNP vesicles fail to target and fuse with the Golgi complex whereas GTP vesicles are functional. All the cytosolic proteins required for vesicle formation are retained on GMP-PNP vesicles, while Sar1p dissociates from GTP vesicles. Thin section electron microscopy of purified preparations reveals a uniform population of 60-65 nm vesicles with a 10 nm thick electron dense coat. The subunits of this novel coat complex are molecularly distinct from the constituents of the nonclathrin coatomer involved in intra-Golgi transport. Because the overall cycle of budding driven by these two types of coats appears mechanistically similar, we propose that the coat structures be called COPI and COPII.
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            ER-to-Golgi transport visualized in living cells.

            Newly synthesized proteins that leave the endoplasmic reticulum (ER) are funnelled through the Golgi complex before being sorted for transport to their different final destinations. Traditional approaches have elucidated the biochemical requirements for such transport and have established a role for transport intermediates. New techniques for tagging proteins fluorescently have made it possible to follow the complete life history of single transport intermediates in living cells, including their formation, path and velocity en route to the Golgi complex. We have now visualized ER-to-Golgi transport using the viral glycoprotein ts045 VSVG tagged with green fluorescent protein (VSVG-GFP). Upon export from the ER, VSVG-GFP became concentrated in many differently shaped, rapidly forming pre-Golgi structures, which translocated inwards towards the Golgi complex along microtubules by using the microtubule minus-end-directed motor complex of dynein/dynactin. No loss of fluorescent material from pre-Golgi structures occurred during their translocation to the Golgi complex and they frequently stretched into tubular shapes. Together, our results indicate that these pre-Golgi carrier structures moving unidirectionally along microtubule tracks are responsible for transporting VSVG-GFP through the cytoplasm to the Golgi complex. This contrasts with the traditional focus on small vesicles as the primary vehicles for ER-to-Golgi transport.
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              3' UTRs are the primary regulators of gene expression in the C. elegans germline.

              How genes are regulated to produce the correct assortment of proteins for every cell type is a fundamental question in biology. For many genes, regulation begins at the DNA level with the use of promoter sequences to control transcription. Regulation can also occur after transcription using sequences in the 3' untranslated region (UTR) of the mRNA to affect mRNA stability and/or translation [1]. The C. elegans gonad is an excellent tissue to study gene regulation during development: In the adult, germ cells are arranged in order of differentiation, with undifferentiated progenitors at one end of the gonad, cells in meiotic prophase in the middle, and gametes at the other end [2]. Using a transgenic assay, we have compared the contribution of promoters and 3' UTRs to gene regulation during germline development. We find that for most genes tested, 3' UTRs are sufficient for regulation. With the exception of promoters activated during spermatogenesis, promoters are permissive for expression in all germ cell types (from progenitors to oocytes and sperm). In progenitors, 3' UTRs inhibit the production of meiotic and oocyte proteins by posttranscriptional mechanisms involving PUF- and KH-domain RNA-binding proteins. Our findings indicate that many genes rely primarily on 3' UTRs, not promoters, for regulation during germline development.
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                Author and article information

                Journal
                Proc Natl Acad Sci U S A
                Proc. Natl. Acad. Sci. U.S.A
                pnas
                pnas
                PNAS
                Proceedings of the National Academy of Sciences of the United States of America
                National Academy of Sciences
                0027-8424
                1091-6490
                12 September 2017
                29 August 2017
                : 114
                : 37
                : E7707-E7716
                Affiliations
                [1] aDepartment of Biomolecular Chemistry, University of Wisconsin–Madison School of Medicine and Public Health , Madison, WI 53706;
                [2] bStructural Genomics Consortium, University of Toronto , Toronto, ON M5G 1L7, Canada;
                [3] cDepartment of Molecular and Cell Biology, University of California, Berkeley , CA 94720;
                [4] d Howard Hughes Medical Institute , University of California, Berkeley , CA 94720;
                [5] eDepartment of Biomedical Engineering, University of Wisconsin–Madison , Madison, WI 53706;
                [6] fWisconsin Institute for Discovery, University of Wisconsin–Madison , Madison, WI 53706;
                [7] gDepartment of Chemical Physiology, The Scripps Research Institute , La Jolla, CA 92037;
                [8] hDepartment of Pharmacology and Toxicology, University of Toronto , Toronto, ON M5S 1A8, Canada
                Author notes
                1To whom correspondence should be addressed. Email: audhya@ 123456wisc.edu .

                Edited by Jennifer Lippincott-Schwartz, Howard Hughes Medical Institute, Ashburn, VA, and approved July 31, 2017 (received for review June 2, 2017)

                Author contributions: M.G.H., S.B., E.B.F., F.H., A.J., L.Y., G.K., J.J.M., J.R.Y., R.A., R.S., Y.T., and A.A. designed research; M.G.H., S.B., E.B.F., F.H., A.J., L.Y., G.K., J.J.M., and A.A. performed research; M.G.H., S.B., E.B.F., F.H., A.J., L.Y., G.K., J.J.M., J.R.Y., R.A., R.S., Y.T., and A.A. contributed new reagents/analytic tools; M.G.H., S.B., E.B.F., F.H., A.J., L.Y., G.K., J.J.M., J.R.Y., R.A., R.S., Y.T., and A.A. analyzed data; and M.G.H. and A.A. wrote the paper.

                Author information
                http://orcid.org/0000-0001-8615-6409
                Article
                PMC5604033 PMC5604033 5604033 201709120
                10.1073/pnas.1709120114
                5604033
                28851831
                2ceeea55-10e3-4981-a958-d72971d677c2
                History
                Page count
                Pages: 10
                Funding
                Funded by: HHS | NIH | National Institute of General Medical Sciences (NIGMS) 100000057
                Award ID: GM110567
                Funded by: HHS | NIH | National Institute of General Medical Sciences (NIGMS) 100000057
                Award ID: GM103533
                Funded by: American Cancer Society (ACS) 100000048
                Award ID: 123268-RSG-12-139-01-CSM
                Funded by: Brain Research Foundation (BRF) 100000882
                Award ID: BRFSG-2015-03
                Categories
                PNAS Plus
                Biological Sciences
                Cell Biology
                PNAS Plus

                COPII,Trk-fused gene,tether,coat disassembly,endoplasmic reticulum

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