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      JAZ repressors of metabolic defense promote growth and reproductive fitness in Arabidopsis

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          The plant hormone jasmonate promotes resistance to plant-eating organisms, ranging from pathogenic microbes to mammals. Jasmonate reprograms metabolism to fuel the production of diverse defense compounds and simultaneously inhibits plant growth. Understanding how growth is influenced across a range of defense levels remains unclear, but has important implications for optimizing crop productivity. Using a genetic approach to “tune” the jasmonate response, we assessed the physiological consequences of discrete levels of defense throughout the plant life cycle. Overactivation of jasmonate response led to carbon starvation, near loss of seed production and, under extreme conditions, lethality. Our findings explain the emergence of diverse strategies to keep jasmonate responses at bay and provide new insights into metabolic processes that underlie growth–defense trade-offs.

          Abstract

          Plant immune responses mediated by the hormone jasmonoyl- l-isoleucine (JA-Ile) are metabolically costly and often linked to reduced growth. Although it is known that JA-Ile activates defense responses by triggering the degradation of JASMONATE ZIM DOMAIN (JAZ) transcriptional repressor proteins, expansion of the JAZ gene family in vascular plants has hampered efforts to understand how this hormone impacts growth and other physiological tasks over the course of ontogeny. Here, we combined mutations within the 13-member Arabidopsis JAZ gene family to investigate the effects of chronic JAZ deficiency on growth, defense, and reproductive output. A higher-order mutant ( jaz decuple, jazD) defective in 10 JAZ genes ( JAZ17, -9, -10, and -13) exhibited robust resistance to insect herbivores and fungal pathogens, which was accompanied by slow vegetative growth and poor reproductive performance. Metabolic phenotypes of jazD discerned from global transcript and protein profiling were indicative of elevated carbon partitioning to amino acid-, protein-, and endoplasmic reticulum body-based defenses controlled by the JA-Ile and ethylene branches of immunity. Resource allocation to a strong defense sink in jazD leaves was associated with increased respiration and hallmarks of carbon starvation but no overt changes in photosynthetic rate. Depletion of the remaining JAZ repressors in jazD further exaggerated growth stunting, nearly abolished seed production and, under extreme conditions, caused spreading necrotic lesions and tissue death. Our results demonstrate that JAZ proteins promote growth and reproductive success at least in part by preventing catastrophic metabolic effects of an unrestrained immune response.

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          JAZ repressor proteins are targets of the SCF(COI1) complex during jasmonate signalling.

          Jasmonate and related signalling compounds have a crucial role in both host immunity and development in plants, but the molecular details of the signalling mechanism are poorly understood. Here we identify members of the jasmonate ZIM-domain (JAZ) protein family as key regulators of jasmonate signalling. JAZ1 protein acts to repress transcription of jasmonate-responsive genes. Jasmonate treatment causes JAZ1 degradation and this degradation is dependent on activities of the SCF(COI1) ubiquitin ligase and the 26S proteasome. Furthermore, the jasmonoyl-isoleucine (JA-Ile) conjugate, but not other jasmonate-derivatives such as jasmonate, 12-oxo-phytodienoic acid, or methyl-jasmonate, promotes physical interaction between COI1 and JAZ1 proteins in the absence of other plant proteins. Our results suggest a model in which jasmonate ligands promote the binding of the SCF(COI1) ubiquitin ligase to and subsequent degradation of the JAZ1 repressor protein, and implicate the SCF(COI1)-JAZ1 protein complex as a site of perception of the plant hormone JA-Ile.
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            JASMONATE-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis.

            In spite of the importance of jasmonates (JAs) as plant growth and stress regulators, the molecular components of their signaling pathway remain largely unknown. By means of a genetic screen that exploits the cross talk between ethylene (ET) and JAs, we describe the identification of several new loci involved in JA signaling and the characterization and positional cloning of one of them, JASMONATE-INSENSITIVE1 (JAI1/JIN1). JIN1 encodes AtMYC2, a nuclear-localized basic helix-loop-helix-leucine zipper transcription factor, whose expression is rapidly upregulated by JA, in a CORONATINE INSENSITIVE1-dependent manner. Gain-of-function experiments confirmed the relevance of AtMYC2 in the activation of JA signaling. AtMYC2 differentially regulates the expression of two groups of JA-induced genes. The first group includes genes involved in defense responses against pathogens and is repressed by AtMYC2. Consistently, jin1 mutants show increased resistance to necrotrophic pathogens. The second group, integrated by genes involved in JA-mediated systemic responses to wounding, is activated by AtMYC2. Conversely, Ethylene-Response-Factor1 (ERF1) positively regulates the expression of the first group of genes and represses the second. These results highlight the existence of two branches in the JA signaling pathway, antagonistically regulated by AtMYC2 and ERF1, that are coincident with the alternative responses activated by JA and ET to two different sets of stresses, namely pathogen attack and wounding.
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              The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses.

              Jasmonates (JAs) trigger an important transcriptional reprogramming of plant cells to modulate both basal development and stress responses. In spite of the importance of transcriptional regulation, only one transcription factor (TF), the Arabidopsis thaliana basic helix-loop-helix MYC2, has been described so far as a direct target of JAZ repressors. By means of yeast two-hybrid screening and tandem affinity purification strategies, we identified two previously unknown targets of JAZ repressors, the TFs MYC3 and MYC4, phylogenetically closely related to MYC2. We show that MYC3 and MYC4 interact in vitro and in vivo with JAZ repressors and also form homo- and heterodimers with MYC2 and among themselves. They both are nuclear proteins that bind DNA with sequence specificity similar to that of MYC2. Loss-of-function mutations in any of these two TFs impair full responsiveness to JA and enhance the JA insensitivity of myc2 mutants. Moreover, the triple mutant myc2 myc3 myc4 is as impaired as coi1-1 in the activation of several, but not all, JA-mediated responses such as the defense against bacterial pathogens and insect herbivory. Our results show that MYC3 and MYC4 are activators of JA-regulated programs that act additively with MYC2 to regulate specifically different subsets of the JA-dependent transcriptional response.
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                Author and article information

                Journal
                Proc Natl Acad Sci U S A
                Proc. Natl. Acad. Sci. U.S.A
                pnas
                pnas
                PNAS
                Proceedings of the National Academy of Sciences of the United States of America
                National Academy of Sciences
                0027-8424
                1091-6490
                6 November 2018
                22 October 2018
                22 October 2018
                : 115
                : 45
                : E10768-E10777
                Affiliations
                [1] aDepartment of Energy Plant Research Laboratory, Michigan State University , East Lansing, MI 48824;
                [2] bDepartment of Biochemistry and Molecular Biology, Michigan State University , East Lansing, MI 48824;
                [3] cPlant Resilience Institute, Michigan State University , East Lansing, MI 48824
                Author notes
                2To whom correspondence should be addressed. Email: howeg@ 123456msu.edu .

                Edited by Mark Estelle, University of California, San Diego, La Jolla, CA, and approved September 26, 2018 (received for review July 9, 2018)

                Author contributions: Q.G., Y.Y., I.T.M., C.B., and G.A.H. designed research; Q.G., Y.Y., I.T.M., K.W., K.S., G.K., and N.E.H. performed research; Q.G., Y.Y., I.T.M., C.B., and G.A.H. analyzed data; and Q.G., I.T.M., and G.A.H. wrote the paper.

                1Q.G. and Y.Y. contributed equally to this work.

                Author information
                http://orcid.org/0000-0003-1884-823X
                http://orcid.org/0000-0003-1715-990X
                http://orcid.org/0000-0002-8335-1396
                http://orcid.org/0000-0001-8585-3667
                http://orcid.org/0000-0002-9218-979X
                Article
                201811828
                10.1073/pnas.1811828115
                6233084
                30348775
                288e272b-cfd4-4844-b3c6-8f6759e93516
                Copyright © 2018 the Author(s). Published by PNAS.

                This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND).

                History
                Page count
                Pages: 10
                Funding
                Funded by: U.S. Department of Energy (DOE) 100000015
                Award ID: DE-FG02-91ER20021
                Award Recipient : Qiang Guo Award Recipient : Yuki Yoshida Award Recipient : Ian T Major Award Recipient : Kun Wang Award Recipient : Koichi Sugimoto Award Recipient : George Kapali Award Recipient : Nathan E Havko Award Recipient : Christoph Benning Award Recipient : Gregg A Howe
                Funded by: HHS | National Institutes of Health (NIH) 100000002
                Award ID: GM57795
                Award Recipient : Yuki Yoshida Award Recipient : Gregg A Howe
                Funded by: Japan Society for Promotion of Science Research Fellowship for Young Scientists
                Award ID: 24-824
                Award Recipient : Koichi Sugimoto Award Recipient : Gregg A Howe
                Funded by: Michigan AgBioResearch
                Award ID: MICL02278
                Award Recipient : Koichi Sugimoto Award Recipient : Gregg A Howe
                Categories
                PNAS Plus
                Biological Sciences
                Plant Biology
                PNAS Plus

                jasmonate,growth–defense trade-off,plant immunity,plant-insect interaction,carbon starvation

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