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      The skull of the Turks and Caicos rock iguana, Cyclura carinata (Squamata: Iguanidae)

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          Abstract

          We provide a detailed and first description of the skull, hyoid apparatus, and trachea of the Turks and Caicos rock iguana, Cyclura carinata (Squamata: Iguanidae). Cyclura is a radiation of iguanas restricted to islands of the Caribbean Sea. Species of Cyclura have high rates of endemism, and all species are severely threatened with extinction. Our anatomical description of this threatened iguana is based on high-resolution computed tomography scans of one adult, one putative adult or near adult, and one juvenile specimen, and includes three-dimensional segmented renderings and visualizations. We discuss some observations of intraspecific and ontogenetic variation, and provide a brief comparison with specimens of another species of Cyclura and published descriptions of other iguanas. Our study provides a cranial osteological framework for Cyclura and augments the body of knowledge on iguana anatomy generally. Finally, we posit that our description and future studies may facilitate identification of fossil Cyclura, which could help understand the paleobiogeography of the genus.

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          3D Slicer as an image computing platform for the Quantitative Imaging Network.

          Quantitative analysis has tremendous but mostly unrealized potential in healthcare to support objective and accurate interpretation of the clinical imaging. In 2008, the National Cancer Institute began building the Quantitative Imaging Network (QIN) initiative with the goal of advancing quantitative imaging in the context of personalized therapy and evaluation of treatment response. Computerized analysis is an important component contributing to reproducibility and efficiency of the quantitative imaging techniques. The success of quantitative imaging is contingent on robust analysis methods and software tools to bring these methods from bench to bedside. 3D Slicer is a free open-source software application for medical image computing. As a clinical research tool, 3D Slicer is similar to a radiology workstation that supports versatile visualizations but also provides advanced functionality such as automated segmentation and registration for a variety of application domains. Unlike a typical radiology workstation, 3D Slicer is free and is not tied to specific hardware. As a programming platform, 3D Slicer facilitates translation and evaluation of the new quantitative methods by allowing the biomedical researcher to focus on the implementation of the algorithm and providing abstractions for the common tasks of data communication, visualization and user interface development. Compared to other tools that provide aspects of this functionality, 3D Slicer is fully open source and can be readily extended and redistributed. In addition, 3D Slicer is designed to facilitate the development of new functionality in the form of 3D Slicer extensions. In this paper, we present an overview of 3D Slicer as a platform for prototyping, development and evaluation of image analysis tools for clinical research applications. To illustrate the utility of the platform in the scope of QIN, we discuss several use cases of 3D Slicer by the existing QIN teams, and we elaborate on the future directions that can further facilitate development and validation of imaging biomarkers using 3D Slicer. Copyright © 2012 Elsevier Inc. All rights reserved.
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            Assembling the Squamate Tree of Life: Perspectives from the Phenotype and the Fossil Record

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              Phylogeny And Systematics Of Squamata (Reptilia) Based On Morphology

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                Author and article information

                Contributors
                Journal
                PeerJ
                PeerJ
                peerj
                PeerJ
                PeerJ Inc. (San Diego, USA )
                2167-8359
                15 July 2024
                2024
                : 12
                : e17595
                Affiliations
                [1 ]Museum of Vertebrate Zoology, University of California, Berkeley , Califiornia, United States of America
                [2 ]Department of Environmental Science, University of San Francisco , San Francisco, CA, United States of America
                Article
                17595
                10.7717/peerj.17595
                11257063
                39026542
                26f2bd2b-5d8c-4a45-8b70-6edfc8bd738a
                ©2024 Lai and Scarpetta

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.

                History
                : 19 January 2024
                : 28 May 2024
                Funding
                Funded by: NSF DBI
                Award ID: 2109461
                This work was supported by NSF DBI (No. 2109461). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Paleontology
                Zoology

                osteology,paletontology,morphology,iguanidae,cranial anatomy,ontogeny,squamata,turks and caicos rock iguana,cyclura carinata,cyclura

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