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      Engineered biosynthesis of milbemycins in the avermectin high-producing strain Streptomyces avermitilis

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          Abstract

          Background

          Milbemycins, produced from Streptomyces hygroscopicus subsp. aureolacrimosus and Streptomyces bingchenggensis, are 16-membered macrolides that share structural similarity with avermectin produced from Streptomyces avermitilis. Milbemycins possess strong acaricidal, insecticidal, and anthelmintic activities but low toxicity. Due to the high commercial value of the milbemycins and increasing resistance to the avermectins and their derivatives, it is imperative to develop an efficient combinatorial biosynthesis system exploiting an overproduction host strain to produce the milbemycins and novel analogs in large quantities.

          Results

          The respective replacement of AveA1 and AveA3 (or module 7 in AveA3) of the avermectin polyketide synthase (PKS) in the avermectin high-producing strain S. avermitilis SA-01 with MilA1 and MilA3 (or module 7 in MilA3) of the milbemycin PKS resulted in the production of milbemycins A3, A4, and D in small amounts and their respective C5- O-methylated congener milbemycins B2, B3, and G as major products with total titers of approximately 292 mg/l. Subsequent inactivation of the C5- O-methyltransferase AveD led to a production of milbemycins A3/A4 (the main components of the commercial product milbemectin) in approximately 225 and 377 mg/l in the flask and 5 l fermenter culture, respectively, along with trace amounts of milbemycin D.

          Conclusions

          We demonstrated that milbemycin biosynthesis can be engineered in the avermectin-producing S. avermitilis by combinatorial biosynthesis with only a slight decrease in its production level. Application of a similar strategy utilizing higher producing industrial strains will provide a more efficient combinatorial biosynthesis system based on S. avermitilis for further enhanced production of the milbemycins and their novel analogs with improved insecticidal potential.

          Electronic supplementary material

          The online version of this article (doi:10.1186/s12934-017-0626-8) contains supplementary material, which is available to authorized users.

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          Most cited references33

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          Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis.

          Species of the genus Streptomyces are of major pharmaceutical interest because they synthesize a variety of bioactive secondary metabolites. We have determined the complete nucleotide sequence of the linear chromosome of Streptomyces avermitilis. S. avermitilis produces avermectins, a group of antiparasitic agents used in human and veterinary medicine. The genome contains 9,025,608 bases (average GC content, 70.7%) and encodes at least 7,574 potential open reading frames (ORFs). Thirty-five percent of the ORFs (2,664) constitute 721 paralogous families. Thirty gene clusters related to secondary metabolite biosynthesis were identified, corresponding to 6.6% of the genome. Comparison with Streptomyces coelicolor A3(2) revealed that an internal 6.5-Mb region in the S. avermitilis genome was highly conserved with respect to gene order and content, and contained all known essential genes but showed perfectly asymmetric structure at the oriC center. In contrast, the terminal regions were not conserved and preferentially contained nonessential genes.
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            Plasmid cloning vectors for the conjugal transfer of DNA from Escherichia coli to Streptomyces spp.

            We have constructed cloning vectors for the conjugal transfer of DNA from Escherichia coli to Streptomyces spp. All vectors contain the 760-bp oriT fragment from the IncP plasmid, RK2. Transfer functions need to be supplied in trans by the E. coli donor strain. We have incorporated into these vectors selectable antibiotic-resistance markers (AmR, ThR, SpR) that function in Streptomyces spp. and other features that should allow for: (i) integration via homologous recombination between cloned DNA and the Streptomyces spp. chromosome, (ii) autonomous replication, or (iii) site-specific integration at the bacteriophage phi C31 attachment site. Shuttle cosmids for constructing genomic libraries and bacteriophage P1 cloning vector capable of accepting approx. 100-kb fragments are also described. A simple mating procedure has been developed for the conjugal transfer of these vectors from E. coli to Streptomyces spp. that involves plating of the donor strain and either germinated spores or mycelial fragments of the recipient strain. We have shown that several of these vectors can be introduced into Streptomyces fradiae, a strain that is notoriously difficult to transform by PEG-mediated protoplast transformation.
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              Avermectins, new family of potent anthelmintic agents: producing organism and fermentation.

              The avermectins are a complex of chemically related agents which exhibit extraordinarily potent anthelmintic activity. They are produced by a novel species of actinomycete, NRRL 8165, which we have named Streptomyces avermitilis. The morphological and cultural characteristics which differentiate the producing organism from other species are described. The avermectins have been identified as a series of macrocyclic lactone derivatives which, in contrast to the macrolide or polyene antibiotics, lack significant antibacterial or antifungal activity. The avermectin complex is fully active against the gastrointestinal nematode Nematospiroides dubius when fed to infected mice for 6 days at 0.0002% of the diet. Fermentation development, including medium modification and strain selection, resulted in increasing the broth yields from 9 to 500 mug/ml.
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                Author and article information

                Contributors
                icrystal0128@gmail.com
                wanjecho@farmhannong.com
                smch517@ewha.ac.kr
                swpark@kopo.ac.kr
                kaeunkim@farmhannong.com
                eunji0618@hanmail.net
                nero4018@gmail.com
                sjnam@ewha.ac.kr
                kihoonoh@farmhannong.com
                joonyoon@ewha.ac.kr
                Journal
                Microb Cell Fact
                Microb. Cell Fact
                Microbial Cell Factories
                BioMed Central (London )
                1475-2859
                17 January 2017
                17 January 2017
                2017
                : 16
                : 9
                Affiliations
                [1 ]Department of Chemistry and Nano Science, Ewha Womans University, 52, Ewhayeodae-gil, Seoul, 03760 Republic of Korea
                [2 ]Crop Protection R&D Center, FarmHannong Co., Ltd, 39-23, Dongan-ro 1113beon-gil, Yeonmu-eup, Nonsan-si, Chungcheongnam-do 33010 Republic of Korea
                [3 ]Department of Bioinformatics, Bio Campus of Korea Polytechnic, 48, Dongan-ro 112-gil, Ganggyeong-eup, Nonsan-si, Chungcheongnam-do 32943 Republic of Korea
                Article
                626
                10.1186/s12934-017-0626-8
                5240415
                28095865
                1e359848-a1fc-4b5e-a05b-5a4711462a31
                © The Author(s) 2017

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 15 November 2016
                : 4 January 2017
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100003624, Ministry of Agriculture, Food and Rural Affairs;
                Award ID: 114048-03-3-CG000
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100003621, Ministry of Science, ICT and Future Planning;
                Award ID: 2016R1A2A1A05005078
                Award ID: 20110031961
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100002701, Ministry of Education;
                Award ID: 2016R1A6A3A11930649
                Award Recipient :
                Categories
                Research
                Custom metadata
                © The Author(s) 2017

                Biotechnology
                milbemycins,avermectins,biosynthesis,streptomyces avermitilis
                Biotechnology
                milbemycins, avermectins, biosynthesis, streptomyces avermitilis

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