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      Sleep Stage Classification Using Time-Frequency Spectra From Consecutive Multi-Time Points

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          Abstract

          Sleep stage classification is an open challenge in the field of sleep research. Considering the relatively small size of datasets used by previous studies, in this paper we used the Sleep Heart Health Study dataset from the National Sleep Research Resource database. A long short-term memory (LSTM) network using a time-frequency spectra of several consecutive 30 s time points as an input was used to perform the sleep stage classification. Four classical convolutional neural networks (CNNs) using a time-frequency spectra of a single 30 s time point as an input were used for comparison. Results showed that, when considering the temporal information within the time-frequency spectrum of a single 30 s time point, the LSTM network had a better classification performance than the CNNs. Moreover, when additional temporal information was taken into consideration, the classification performance of the LSTM network gradually increased. It reached its peak when temporal information from three consecutive 30 s time points was considered, with a classification accuracy of 87.4% and a Cohen’s Kappa coefficient of 0.8216. Compared with CNNs, our results indicate that for sleep stage classification, the temporal information within the data or the features extracted from the data should be considered. LSTM networks take this temporal information into account, and thus, may be more suitable for sleep stage classification.

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          Most cited references27

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          Very Deep Convolutional Networks for Large-Scale Image Recognition

          In this work we investigate the effect of the convolutional network depth on its accuracy in the large-scale image recognition setting. Our main contribution is a thorough evaluation of networks of increasing depth using an architecture with very small (3x3) convolution filters, which shows that a significant improvement on the prior-art configurations can be achieved by pushing the depth to 16-19 weight layers. These findings were the basis of our ImageNet Challenge 2014 submission, where our team secured the first and the second places in the localisation and classification tracks respectively. We also show that our representations generalise well to other datasets, where they achieve state-of-the-art results. We have made our two best-performing ConvNet models publicly available to facilitate further research on the use of deep visual representations in computer vision.
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            The Sleep Heart Health Study: design, rationale, and methods.

            The Sleep Heart Health Study (SHHS) is a prospective cohort study designed to investigate obstructive sleep apnea (OSA) and other sleep-disordered breathing (SDB) as risk factors for the development of cardiovascular disease. The study is designed to enroll 6,600 adult participants aged 40 years and older who will undergo a home polysomnogram to assess the presence of OSA and other SDB. Participants in SHHS have been recruited from cohort studies in progress. Therefore, SHHS adds the assessment of OSA to the protocols of these studies and will use already collected data on the principal risk factors for cardiovascular disease as well as follow-up and outcome information pertaining to cardiovascular disease. Parent cohort studies and recruitment targets for these cohorts are the following: Atherosclerosis Risk in Communities Study (1,750 participants), Cardiovascular Health Study (1,350 participants), Framingham Heart Study (1,000 participants), Strong Heart Study (600 participants), New York Hypertension Cohorts (1,000 participants), and Tucson Epidemiologic Study of Airways Obstructive Diseases and the Health and Environment Study (900 participants). As part of the parent study follow-up procedures, participants will be surveyed at periodic intervals for the incidence and recurrence of cardiovascular disease events. The study provides sufficient statistical power for assessing OSA and other SDB as risk factors for major cardiovascular events, including myocardial infarction and stroke.
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              DeepSleepNet: A Model for Automatic Sleep Stage Scoring Based on Raw Single-Channel EEG

              This paper proposes a deep learning model, named DeepSleepNet, for automatic sleep stage scoring based on raw single-channel EEG. Most of the existing methods rely on hand-engineered features, which require prior knowledge of sleep analysis. Only a few of them encode the temporal information, such as transition rules, which is important for identifying the next sleep stages, into the extracted features. In the proposed model, we utilize convolutional neural networks to extract time-invariant features, and bidirectional-long short-term memory to learn transition rules among sleep stages automatically from EEG epochs. We implement a two-step training algorithm to train our model efficiently. We evaluated our model using different single-channel EEGs (F4-EOG (left), Fpz-Cz, and Pz-Oz) from two public sleep data sets, that have different properties (e.g., sampling rate) and scoring standards (AASM and R&K). The results showed that our model achieved similar overall accuracy and macro F1-score (MASS: 86.2%-81.7, Sleep-EDF: 82.0%-76.9) compared with the state-of-the-art methods (MASS: 85.9%-80.5, Sleep-EDF: 78.9%-73.7) on both data sets. This demonstrated that, without changing the model architecture and the training algorithm, our model could automatically learn features for sleep stage scoring from different raw single-channel EEGs from different data sets without utilizing any hand-engineered features.
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                Author and article information

                Contributors
                Journal
                Front Neurosci
                Front Neurosci
                Front. Neurosci.
                Frontiers in Neuroscience
                Frontiers Media S.A.
                1662-4548
                1662-453X
                28 January 2020
                2020
                : 14
                : 14
                Affiliations
                Engineering Research Center of Molecular and Neuro Imaging of Ministry of Education, School of Life Sciences and Technology, Xidian University , Xi’an, China
                Author notes

                Edited by: Zhi-Li Huang, Fudan University, China

                Reviewed by: Michael A. Grandner, The University of Arizona, United States; Michelle Claire Dumoulin Bridi, Johns Hopkins University, United States

                *Correspondence: Wei Qin, wqin@ 123456xidian.edu.cn

                This article was submitted to Sleep and Circadian Rhythms, a section of the journal Frontiers in Neuroscience

                Article
                10.3389/fnins.2020.00014
                6997491
                32038151
                15dbfd36-d59b-449d-ae7f-685259e33881
                Copyright © 2020 Xu, Yang, Sun, Liu and Qin.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 17 September 2019
                : 08 January 2020
                Page count
                Figures: 8, Tables: 1, Equations: 4, References: 30, Pages: 10, Words: 0
                Funding
                Funded by: National Basic Research Program of China (973 Program) 10.13039/501100012166
                Award ID: 2015CB856403
                Award ID: 2014CB543203
                Funded by: National Natural Science Foundation of China 10.13039/501100001809
                Award ID: 81471811
                Award ID: 81471738
                Categories
                Neuroscience
                Original Research

                Neurosciences
                sleep stage classification,deep learning,electroencephalogram,long short-term memory network,time-frequency spectrum

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