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      Immunoglobulin heavy chain diversity in Pteropid bats: evidence for a diverse and highly specific antigen binding repertoire

      research-article
      1 , 2 , , 1 , 1 , 3
      Immunogenetics
      Springer-Verlag
      Immunoglobulin, Evolution, Bats

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          Abstract

          Bats are the natural host reservoir for range of emerging and re-emerging viruses, many of which cause significant morbidity and mortality in other mammals, yet appear to result in no clinical consequences for bats. The ability of bats to coexist with a variety of viruses presents an interesting immunological problem that has not been examined in any detail but which could provide significant insights into the evolution of antiviral mechanisms in mammals. Towards a better understanding of the bat immune system, we analysed the expressed heavy chain variable (VH) regions of antibodies from the black flying fox, Pteropus alecto. The germline repertoire of the closely related Pteropid bat, Pteropus vampyrus, whose genome has been sequenced was also examined for comparative purposes. Representative VH genes were found in all three mammalian VH clans (I, II and III) in both the expressed P. alecto VH repertoire and the germline P. vampyrus VH repertoire. Evidence for the use of multiple heavy chain diversity (DH) and joining (JH) segments for the generation of diverse VDJ rearrangements was also present in the expressed antibody repertoire of P. alecto. The long period of co-evolutionary history of bats with viruses may have resulted in a variety of highly specific VH segments being hardwired into the genomes of bats and may have implications for their ability to successfully cope with a diversity of viral antigens.

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          Most cited references48

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          MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment.

          S. KUMAR (2004)
          With its theoretical basis firmly established in molecular evolutionary and population genetics, the comparative DNA and protein sequence analysis plays a central role in reconstructing the evolutionary histories of species and multigene families, estimating rates of molecular evolution, and inferring the nature and extent of selective forces shaping the evolution of genes and genomes. The scope of these investigations has now expanded greatly owing to the development of high-throughput sequencing techniques and novel statistical and computational methods. These methods require easy-to-use computer programs. One such effort has been to produce Molecular Evolutionary Genetics Analysis (MEGA) software, with its focus on facilitating the exploration and analysis of the DNA and protein sequence variation from an evolutionary perspective. Currently in its third major release, MEGA3 contains facilities for automatic and manual sequence alignment, web-based mining of databases, inference of the phylogenetic trees, estimation of evolutionary distances and testing evolutionary hypotheses. This paper provides an overview of the statistical methods, computational tools, and visual exploration modules for data input and the results obtainable in MEGA.
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            Diversity in the CDR3 region of V(H) is sufficient for most antibody specificities.

            J. Xu, M Davis (2000)
            All rearranging antigen receptor genes have one or two highly diverse complementarity determining regions (CDRs) among the six that typically form the ligand binding surface. We report here that, in the case of antibodies, diversity at one of these regions, CDR3 of the V(H) domain, is sufficient to permit otherwise identical IgM molecules to distinguish between a variety of hapten and protein antigens. Furthermore, we find that somatic mutation can allow such antibodies to achieve surprisingly high affinities. These results are consistent with a model in which the highly diverse CDR3 loops are the key determinant of specificity in antigen recognition in both T cell receptors (TCR) and antibodies, whereas the germline-encoded CDR1 and CDR2 sequences are much more cross-reactive.
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              Evolution by the birth-and-death process in multigene families of the vertebrate immune system.

              Concerted evolution is often invoked to explain the diversity and evolution of the multigene families of major histocompatibility complex (MHC) genes and immunoglobulin (Ig) genes. However, this hypothesis has been controversial because the member genes of these families from the same species are not necessarily more closely related to one another than to the genes from different species. To resolve this controversy, we conducted phylogenetic analyses of several multigene families of the MHC and Ig systems. The results show that the evolutionary pattern of these families is quite different from that of concerted evolution but is in agreement with the birth-and-death model of evolution in which new genes are created by repeated gene duplication and some duplicate genes are maintained in the genome for a long time but others are deleted or become nonfunctional by deleterious mutations. We found little evidence that interlocus gene conversion plays an important role in the evolution of MHC and Ig multigene families.
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                Author and article information

                Contributors
                +61-3-52275052 , +61-3-52275555 , Michelle.Baker@csiro.au
                Journal
                Immunogenetics
                Immunogenetics
                Immunogenetics
                Springer-Verlag (Berlin/Heidelberg )
                0093-7711
                1432-1211
                17 February 2010
                2010
                : 62
                : 3
                : 173-184
                Affiliations
                [1 ]GRID grid.413322.5, ISNI 0000000121888254, CSIRO Livestock Industries, , Australian Animal Health Laboratory, ; PO Bag 24, Geelong, Victoria 3220 Australia
                [2 ]GRID grid.266832.b, ISNI 0000000121888502, Center for Evolutionary and Theoretical Immunology, Department of Biology, , The University of New Mexico, ; Albuquerque, NM 87131 USA
                [3 ]Australian Biosecurity Cooperative Research Centre for Emerging Infectious Diseases, Geelong, Victoria 3220 Australia
                Article
                425
                10.1007/s00251-010-0425-4
                2887692
                20162414
                109528f7-a78a-4eed-a9fc-859d3de8267a
                © Springer-Verlag 2010

                This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.

                History
                : 4 August 2009
                : 22 January 2010
                Categories
                Original Paper
                Custom metadata
                © Springer-Verlag 2010

                Genetics
                immunoglobulin,evolution,bats
                Genetics
                immunoglobulin, evolution, bats

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