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      Mycobiome Dysbiosis in Women with Intrauterine Adhesions

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          ABSTRACT

          The vaginal microbiota dysbiosis is closely associated with the development of reproductive diseases. However, the contribution of mycobiome to intrauterine adhesion (IUA) disease remains unknown. Harnessing 16S and ITS2 rDNA sequencing analysis, we investigate both bacterial and fungal microbiota compositions across 174 samples taken from both cervical canal (CC) and middle vagina (MV) sites of IUA patients. Overall, there is no significant difference in microbial diversity between healthy subjects (HS) and IUA patients. However, we observe the IUA-specific bacterial alterations such as increased Dialister and decreased Bifidobacterium and enriched fungal genera like increased Filobasidium and Exophiala. Moreover, site-specific fungal-bacterial correlation networks are discovered in both CC and MV samples of IUA patients. Mechanistic investigation shows that Candida parapsilosis, other than Candida albicans and Candida maltosa, prevents the exacerbation of inflammatory activities and fibrosis, and modulates bacterial microbiota during IUA progression in a rat model of IUA. Our study thus highlights the importance of mycobiota in IUA progression, which may facilitate the development of therapeutic target for IUA prevention.

          IMPORTANCE Intrauterine adhesion (IUA) often leads to hypomenorrhea, amenorrhea, repeat miscarriages, and infertility. It has been prevalent over the last few decades in up to 13% of women who experience pregnancy termination during the first trimester, and 30% of women undergo dilation and curettage after a late, spontaneous abortion. However, the pathogenesis of IUA remains unclear. Despite reports of microbiota dysbiosis during IUA progression, there is little information on the effect of fungal microbiota on the development of IUA. This study not only enhances our understanding of the mycobiome in IUA patients but also provides potential intervention strategies for prevention of IUA by targeting mycobiome.

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          Gut microbiota, metabolites and host immunity.

          The microbiota - the collection of microorganisms that live within and on all mammals - provides crucial signals for the development and function of the immune system. Increased availability of technologies that profile microbial communities is facilitating the entry of many immunologists into the evolving field of host-microbiota studies. The microbial communities, their metabolites and components are not only necessary for immune homeostasis, they also influence the susceptibility of the host to many immune-mediated diseases and disorders. In this Review, we discuss technological and computational approaches for investigating the microbiome, as well as recent advances in our understanding of host immunity and microbial mutualism with a focus on specific microbial metabolites, bacterial components and the immune system.
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            The microbiome and innate immunity.

            The intestinal microbiome is a signalling hub that integrates environmental inputs, such as diet, with genetic and immune signals to affect the host's metabolism, immunity and response to infection. The haematopoietic and non-haematopoietic cells of the innate immune system are located strategically at the host-microbiome interface. These cells have the ability to sense microorganisms or their metabolic products and to translate the signals into host physiological responses and the regulation of microbial ecology. Aberrations in the communication between the innate immune system and the gut microbiota might contribute to complex diseases.
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              Fungal microbiota dysbiosis in IBD

              Objective The bacterial intestinal microbiota plays major roles in human physiology and IBDs. Although some data suggest a role of the fungal microbiota in IBD pathogenesis, the available data are scarce. The aim of our study was to characterise the faecal fungal microbiota in patients with IBD. Design Bacterial and fungal composition of the faecal microbiota of 235 patients with IBD and 38 healthy subjects (HS) was determined using 16S and ITS2 sequencing, respectively. The obtained sequences were analysed using the Qiime pipeline to assess composition and diversity. Bacterial and fungal taxa associated with clinical parameters were identified using multivariate association with linear models. Correlation between bacterial and fungal microbiota was investigated using Spearman's test and distance correlation. Results We observed that fungal microbiota is skewed in IBD, with an increased Basidiomycota/Ascomycota ratio, a decreased proportion of Saccharomyces cerevisiae and an increased proportion of Candida albicans compared with HS. We also identified disease-specific alterations in diversity, indicating that a Crohn's disease-specific gut environment may favour fungi at the expense of bacteria. The concomitant analysis of bacterial and fungal microbiota showed a dense and homogenous correlation network in HS but a dramatically unbalanced network in IBD, suggesting the existence of disease-specific inter-kingdom alterations. Conclusions Besides bacterial dysbiosis, our study identifies a distinct fungal microbiota dysbiosis in IBD characterised by alterations in biodiversity and composition. Moreover, we unravel here disease-specific inter-kingdom network alterations in IBD, suggesting that, beyond bacteria, fungi might also play a role in IBD pathogenesis.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                Microbiol Spectr
                Microbiol Spectr
                spectrum
                Microbiology Spectrum
                American Society for Microbiology (1752 N St., N.W., Washington, DC )
                2165-0497
                22 June 2022
                Jul-Aug 2022
                22 June 2022
                : 10
                : 4
                : e01324-22
                Affiliations
                [a ] State Key Laboratory of Oncogenes and Related Genes, Center for Single-Cell Omics, School of Public Health, Shanghai Jiao Tong University School of Medicine, Shanghai, China
                [b ] Department of Gynecology, Third Xiangya Hospital of Central South University, Changsha, China
                [c ] School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China
                [d ] National Engineering and Research Center of Human Stem Cell, Guangxiu Hospital Hunan Normal University, Changsha, Hunan, China
                [e ] Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada
                [f ] Department of Mathematics, Shanghai Normal University, Shanghai, China
                [g ] The State Key Laboratory of Respiratory Disease, Guangzhou Medical University, Guangzhou, China
                [h ] The Third Hospital Affiliated to the Chinese University of Hong Kong Shenzhen, Shenzhen, China
                Shenzhen Bay Laboratory
                Author notes

                Ning-Ning Liu, Xingping Zhao, Jing-Cong Tan, and Sheng Liu are co-first authors: these authors contributed equally to this work. Author order was determined in order of decreasing seniority.

                The authors declare no conflict of interest.

                Author information
                https://orcid.org/0000-0003-2791-8981
                Article
                01324-22 spectrum.01324-22
                10.1128/spectrum.01324-22
                9431258
                35730962
                0fc7396f-c692-490e-98f4-3e7275c4fbc1
                Copyright © 2022 Liu et al.

                This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

                History
                : 10 April 2022
                : 20 May 2022
                Page count
                supplementary-material: 1, Figures: 6, Tables: 1, Equations: 0, References: 72, Pages: 15, Words: 9458
                Funding
                Funded by: Natural Science Foundation of Hunan Province;
                Award ID: 2021JJ40956
                Award Recipient :
                Funded by: MOST | National Key Research and Development Program of China (NKPs), FundRef https://doi.org/10.13039/501100012166;
                Award ID: 2018YFC2000700
                Award ID: 2020YFA0907200
                Award Recipient :
                Funded by: National Natural Science Foundation of China (NSFC), FundRef https://doi.org/10.13039/501100001809;
                Award ID: 31900129
                Award ID: 82030099
                Award ID: 81630086
                Award Recipient :
                Funded by: Shanghai Municipal Health Commission (上海市卫生健康委员会), FundRef https://doi.org/10.13039/100017950;
                Award ID: GWV-10.1-XK15
                Award Recipient :
                Categories
                Research Article
                human-microbiome, Human Microbiome
                Custom metadata
                July/August 2022

                intrauterine adhesions,reproductive tract,mycobiome,dysbiosis,fungal-bacterial correlation

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