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      Fast Healthcare Interoperability Resources for Inpatient Deterioration Detection With Time-Series Vital Signs: Design and Implementation Study

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          Abstract

          Background

          Vital signs have been widely adopted in in-hospital cardiac arrest (IHCA) assessment, which plays an important role in inpatient deterioration detection. As the number of early warning systems and artificial intelligence applications increases, health care information exchange and interoperability are becoming more complex and difficult. Although Health Level 7 Fast Healthcare Interoperability Resources (FHIR) have already developed a vital signs profile, it is not sufficient to support IHCA applications or machine learning–based models.

          Objective

          In this paper, for IHCA instances with vital signs, we define a new implementation guide that includes data mapping, a system architecture, a workflow, and FHIR applications.

          Methods

          We interviewed 10 experts regarding health care system integration and defined an implementation guide. We then developed the FHIR Extract Transform Load to map data to FHIR resources. We also integrated an early warning system and machine learning pipeline.

          Results

          The study data set includes electronic health records of adult inpatients who visited the En-Chu-Kong hospital. Medical staff regularly measured these vital signs at least 2 to 3 times per day during the day, night, and early morning. We used pseudonymization to protect patient privacy. Then, we converted the vital signs to FHIR observations in the JSON format using the FHIR Extract Transform Load application. The measured vital signs include systolic blood pressure, diastolic blood pressure, heart rate, respiratory rate, and body temperature. According to clinical requirements, we also extracted the electronic health record information to the FHIR server. Finally, we integrated an early warning system and machine learning pipeline using the FHIR RESTful application programming interface.

          Conclusions

          We successfully demonstrated a process that standardizes health care information for inpatient deterioration detection using vital signs. Based on the FHIR definition, we also provided an implementation guide that includes data mapping, an integration process, and IHCA assessment using vital signs. We also proposed a clarifying system architecture and possible workflows. Based on FHIR, we integrated the 3 different systems in 1 dashboard system, which can effectively solve the complexity of the system in the medical staff workflow.

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          Most cited references27

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          Privacy and artificial intelligence: challenges for protecting health information in a new era

          Background Advances in healthcare artificial intelligence (AI) are occurring rapidly and there is a growing discussion about managing its development. Many AI technologies end up owned and controlled by private entities. The nature of the implementation of AI could mean such corporations, clinics and public bodies will have a greater than typical role in obtaining, utilizing and protecting patient health information. This raises privacy issues relating to implementation and data security. Main body The first set of concerns includes access, use and control of patient data in private hands. Some recent public–private partnerships for implementing AI have resulted in poor protection of privacy. As such, there have been calls for greater systemic oversight of big data health research. Appropriate safeguards must be in place to maintain privacy and patient agency. Private custodians of data can be impacted by competing goals and should be structurally encouraged to ensure data protection and to deter alternative use thereof. Another set of concerns relates to the external risk of privacy breaches through AI-driven methods. The ability to deidentify or anonymize patient health data may be compromised or even nullified in light of new algorithms that have successfully reidentified such data. This could increase the risk to patient data under private custodianship. Conclusions We are currently in a familiar situation in which regulation and oversight risk falling behind the technologies they govern. Regulation should emphasize patient agency and consent, and should encourage increasingly sophisticated methods of data anonymization and protection.
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            Comparison of the Between the Flags calling criteria to the MEWS, NEWS and the electronic Cardiac Arrest Risk Triage (eCART) score for the identification of deteriorating ward patients.

            Traditionally, paper based observation charts have been used to identify deteriorating patients, with emerging recent electronic medical records allowing electronic algorithms to risk stratify and help direct the response to deterioration.
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              Fast Healthcare Interoperability Resources (FHIR) as a Meta Model to Integrate Common Data Models: Development of a Tool and Quantitative Validation Study

              Background In a multisite clinical research collaboration, institutions may or may not use the same common data model (CDM) to store clinical data. To overcome this challenge, we proposed to use Health Level 7’s Fast Healthcare Interoperability Resources (FHIR) as a meta-CDM—a single standard to represent clinical data. Objective In this study, we aimed to create an open-source application termed the Clinical Asset Mapping Program for FHIR (CAMP FHIR) to efficiently transform clinical data to FHIR for supporting source-agnostic CDM-to-FHIR mapping. Methods Mapping with CAMP FHIR involves (1) mapping each source variable to its corresponding FHIR element and (2) mapping each item in the source data’s value sets to the corresponding FHIR value set item for variables with strict value sets. To date, CAMP FHIR has been used to transform 108 variables from the Informatics for Integrating Biology & the Bedside (i2b2) and Patient-Centered Outcomes Research Network data models to fields across 7 FHIR resources. It is designed to allow input from any source data model and will support additional FHIR resources in the future. Results We have used CAMP FHIR to transform data on approximately 23,000 patients with asthma from our institution’s i2b2 database. Data quality and integrity were validated against the origin point of the data, our enterprise clinical data warehouse. Conclusions We believe that CAMP FHIR can serve as an alternative to implementing new CDMs on a project-by-project basis. Moreover, the use of FHIR as a CDM could support rare data sharing opportunities, such as collaborations between academic medical centers and community hospitals. We anticipate adoption and use of CAMP FHIR to foster sharing of clinical data across institutions for downstream applications in translational research.
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                Author and article information

                Contributors
                Journal
                JMIR Med Inform
                JMIR Med Inform
                JMI
                JMIR Medical Informatics
                JMIR Publications (Toronto, Canada )
                2291-9694
                October 2022
                13 October 2022
                : 10
                : 10
                : e42429
                Affiliations
                [1 ] Department of Computer Science and Information Engineering National Taiwan University Taipei City Taiwan
                [2 ] Graduate Institute of Biomedical Electronics and Bioinformatics National Taiwan University Taipei City Taiwan
                Author notes
                Corresponding Author: Tzu-Wei Tseng chaaa463@ 123456gmail.com
                Author information
                https://orcid.org/0000-0003-3939-0424
                https://orcid.org/0000-0002-2479-0620
                https://orcid.org/0000-0001-7147-8122
                Article
                v10i10e42429
                10.2196/42429
                9614630
                36227636
                0ce1067c-2b73-4998-87da-d31948ac568f
                ©Tzu-Wei Tseng, Chang-Fu Su, Feipei Lai. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 13.10.2022.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License ( https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included.

                History
                : 4 September 2022
                : 20 September 2022
                : 22 September 2022
                : 3 October 2022
                Categories
                Original Paper
                Original Paper

                fast healthcare interoperability resources,fhir,health level 7,hl7,health research,data sharing,health information technology,clinical research

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