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      Epitranscriptomics and epiproteomics in cancer drug resistance: therapeutic implications

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          Abstract

          Drug resistance is a major hurdle in cancer treatment and a key cause of poor prognosis. Epitranscriptomics and epiproteomics are crucial in cell proliferation, migration, invasion, and epithelial–mesenchymal transition. In recent years, epitranscriptomic and epiproteomic modification has been investigated on their roles in overcoming drug resistance. In this review article, we summarized the recent progress in overcoming cancer drug resistance in three novel aspects: (i) mRNA modification, which includes alternative splicing, A-to-I modification and mRNA methylation; (ii) noncoding RNAs modification, which involves miRNAs, lncRNAs, and circRNAs; and (iii) posttranslational modification on molecules encompasses drug inactivation/efflux, drug target modifications, DNA damage repair, cell death resistance, EMT, and metastasis. In addition, we discussed the therapeutic implications of targeting some classical chemotherapeutic drugs such as cisplatin, 5-fluorouridine, and gefitinib via these modifications. Taken together, this review highlights the importance of epitranscriptomic and epiproteomic modification in cancer drug resistance and provides new insights on potential therapeutic targets to reverse cancer drug resistance.

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          Central dogma of molecular biology.

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            Autophagy and multidrug resistance in cancer

            Multidrug resistance (MDR) occurs frequently after long-term chemotherapy, resulting in refractory cancer and tumor recurrence. Therefore, combatting MDR is an important issue. Autophagy, a self-degradative system, universally arises during the treatment of sensitive and MDR cancer. Autophagy can be a double-edged sword for MDR tumors: it participates in the development of MDR and protects cancer cells from chemotherapeutics but can also kill MDR cancer cells in which apoptosis pathways are inactive. Autophagy induced by anticancer drugs could also activate apoptosis signaling pathways in MDR cells, facilitating MDR reversal. Therefore, research on the regulation of autophagy to combat MDR is expanding and is becoming increasingly important. We summarize advanced studies of autophagy in MDR tumors, including the variable role of autophagy in MDR cancer cells.
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              m 6 A mRNA demethylase FTO regulates melanoma tumorigenicity and response to anti-PD-1 blockade

              Melanoma is one of the most deadly and therapy-resistant cancers. Here we show that N6-methyladenosine (m6A) mRNA demethylation by fat mass and obesity-associated protein (FTO) increases melanoma growth and decreases response to anti-PD-1 blockade immunotherapy. FTO level is increased in human melanoma and enhances melanoma tumorigenesis in mice. FTO is induced by metabolic starvation stress through the autophagy and NF-κB pathway. Knockdown of FTO increases m6A methylation in the critical protumorigenic melanoma cell-intrinsic genes including PD-1 (PDCD1), CXCR4, and SOX10, leading to increased RNA decay through the m6A reader YTHDF2. Knockdown of FTO sensitizes melanoma cells to interferon gamma (IFNγ) and sensitizes melanoma to anti-PD-1 treatment in mice, depending on adaptive immunity. Our findings demonstrate a crucial role of FTO as an m6A demethylase in promoting melanoma tumorigenesis and anti-PD-1 resistance, and suggest that the combination of FTO inhibition with anti-PD-1 blockade may reduce the resistance to immunotherapy in melanoma.
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                Author and article information

                Contributors
                chenz@stjohns.edu
                zou.chang@szhospital.com
                Journal
                Signal Transduct Target Ther
                Signal Transduct Target Ther
                Signal Transduction and Targeted Therapy
                Nature Publishing Group UK (London )
                2095-9907
                2059-3635
                8 September 2020
                8 September 2020
                2020
                : 5
                : 193
                Affiliations
                [1 ]GRID grid.440218.b, ISNI 0000 0004 1759 7210, Shenzhen People’s Hospital (The Second Clinical Medical College, Jinan University; The First Affiliated Hospital, Southern University of Science and Technology), ; Shenzhen, 518001 Guangdong China
                [2 ]GRID grid.264091.8, ISNI 0000 0001 1954 7928, College of Pharmacy and Health Sciences, , St. John’s University, ; Queens, 11439 New York, USA
                [3 ]GRID grid.12981.33, ISNI 0000 0001 2360 039X, Tomas Lindahl Nobel Laureate Laboratory, Research Centre, The Seventh Affiliated Hospital, , Sun Yat-sen University, ; Shenzhen, 518107 Guangdong China
                [4 ]GRID grid.413431.0, Department of Research, , Affiliated Tumor Hospital of Guangxi Medical University, ; Nanning, 530021 Guangxi China
                [5 ]Shenzhen Public Service Platform on Tumor Precision Medicine and Molecular Diagnosis, Shenzhen, 518001 Guangdong China
                Author information
                http://orcid.org/0000-0002-3305-3294
                http://orcid.org/0000-0002-8289-097X
                Article
                300
                10.1038/s41392-020-00300-w
                7479143
                32900991
                0c6bac15-aaf7-4258-96db-b9dd4b438d28
                © The Author(s) 2020

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 16 June 2020
                : 18 July 2020
                : 28 July 2020
                Funding
                Funded by: FundRef https://doi.org/10.13039/501100002912, Government of Guangdong Province;
                Award ID: 2019B1515120033
                Award ID: 2019B1515120033
                Award Recipient :
                Funded by: FundRef https://doi.org/10.13039/501100010877, Shenzhen Science and Technology Innovation Commission;
                Award ID: JCYJ20180305164128430
                Award ID: 20180225112449943
                Award ID: GJHZ20180928171602104
                Award Recipient :
                Categories
                Review Article
                Custom metadata
                © The Author(s) 2020

                gene therapy,drug development
                gene therapy, drug development

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