9
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Differential effects of light-to-dark transitions on phase setting in circadian expression among clock-controlled genes in Pharbitis nil

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          ABSTRACT

          The circadian clock is synchronized by the day-night cycle to allow plants to anticipate daily environmental changes and to recognize annual changes in day length enabling seasonal flowering. This clock system has been extensively studied in Arabidopsis thaliana and was found to be reset by the dark to light transition at dawn. By contrast, studies on photoperiodic flowering of Pharbitis nil revealed the presence of a clock system reset by the transition from light to dark at dusk to measure the duration of the night. However, a Pharbitis photosynthetic gene was also shown to be insensitive to this dusk transition and to be set by dawn. Thus Pharbitis appeared to have two clock systems, one set by dusk that controls photoperiodic flowering and a second controlling photosynthetic gene expression similar to that of Arabidopsis. Here, we show that circadian mRNA expression of Pharbitis homologs of a series of Arabidopsis clock or clock-controlled genes are insensitive to the dusk transition. These data further define the presence in Pharbitis of a clock system that is analogous to the Arabidopsis system, which co-exists and functions with the dusk-set system dedicated to the control of photoperiodic flowering.

          Related collections

          Most cited references24

          • Record: found
          • Abstract: found
          • Article: not found

          FKF1 and GIGANTEA complex formation is required for day-length measurement in Arabidopsis.

          Precise timing of CONSTANS (CO) gene expression is necessary for day-length discrimination for photoperiodic flowering. The FLAVIN-BINDING, KELCH REPEAT, F-BOX 1 (FKF1), and GIGANTEA (GI) proteins regulate CO transcription in Arabidopsis. We demonstrate that FKF1 and GI proteins form a complex in a blue-light-dependent manner. The timing of this interaction regulates the timing of daytime CO expression. FKF1 function is dependent on GI, which interacts with a CO repressor, CYCLING DOF FACTOR 1 (CDF1), and controls CDF1 stability. GI, FKF1, and CDF1 proteins associate with CO chromatin. Thus, the FKF1-GI complex forms on the CO promoter in late afternoon to regulate CO expression, providing a mechanistic view of how the coincidence of light with circadian timing regulates photoperiodic flowering.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            FKF1 F-box protein mediates cyclic degradation of a repressor of CONSTANS in Arabidopsis.

            The temporal control of CONSTANS (CO) expression and activity is a key mechanism in photoperiodic flowering in Arabidopsis. FLAVIN-BINDING, KELCH REPEAT, F-BOX 1 (FKF1) protein regulates CO transcription, although the molecular mechanism is unknown. We demonstrate here that FKF1 controls the stability of a Dof transcription factor, CYCLING DOF FACTOR 1 (CDF1). FKF1 physically interacts with CDF1, and CDF1 protein is more stable in fkf1 mutants. Plants with elevated levels of CDF1 flower late and have reduced expression of CO. CDF1 and CO are expressed in the same tissues, and CDF1 binds to the CO promoter. Thus, FKF1 controls daily CO expression in part by degrading CDF1, a repressor of CO transcription.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Arabidopsis circadian clock protein, TOC1, is a DNA-binding transcription factor.

              The first described feedback loop of the Arabidopsis circadian clock is based on reciprocal regulation between Timing of CAB Expression 1 (TOC1) and Circadian Clock-associated 1 (CCA1)/late elongated hypocotyl (LHY). CCA1 and LHY are Myb transcription factors that bind directly to the TOC1 promoter to negatively regulate its expression. Conversely, the activity of TOC1 has remained less well characterized. Genetic data support that TOC1 is necessary for the reactivation of CCA1/LHY, but there is little description of its biochemical function. Here we show that TOC1 occupies specific genomic regions in the CCA1 and LHY promoters. Purified TOC1 binds directly to DNA through its CCT domain, which is similar to known DNA-binding domains. Chemical induction and transient overexpression of TOC1 in Arabidopsis seedlings cause repression of CCA1/LHY expression, demonstrating that TOC1 can repress direct targets, and mutation or deletion of the CCT domain prevents this repression showing that DNA-binding is necessary for TOC1 action. Furthermore, we use the Gal4/UAS system in Arabidopsis to show that TOC1 acts as a general transcriptional repressor, and that repression activity is in the pseudoreceiver domain of the protein. To identify the genes regulated by TOC1 on a genomic scale, we couple TOC1 chemical induction with microarray analysis and identify previously unexplored potential TOC1 targets and output pathways. Taken together, these results define a biochemical action for the core clock protein TOC1 and refine our perspective on how plant clocks function.
                Bookmark

                Author and article information

                Journal
                Plant Signal Behav
                Plant Signal Behav
                KPSB
                kpsb20
                Plant Signaling & Behavior
                Taylor & Francis
                1559-2316
                1559-2324
                2018
                26 June 2018
                26 June 2018
                : 13
                : 6
                : e1473686
                Affiliations
                [a ]Department of Plant Developmental Biology, Max Planck Institute for Plant Breeding Research , Cologne, Germany
                [b ]Department of Natural Sciences, International Christian University , Tokyo, Japan
                Author notes
                CONTACT Ryosuke Hayama hryosuke@ 123456icu.ac.jp Department of Plant Developmental Biology, Max Planck Institute for Plant Breeding Research , Carl-von-Linne Weg 10, D-50829 Cologne, Germany
                [#]

                Present address: Department of Natural Sciences, International Christian University, 3-10-2 Osawa, Mitaka 181-8585, Tokyo, Japan

                Author information
                http://orcid.org/0000-0002-0817-8351
                http://orcid.org/0000-0001-6988-4172
                Article
                1473686
                10.1080/15592324.2018.1473686
                6110364
                29944436
                0b4b9440-b8ac-412f-9fd1-755f5568e0a8
                © 2018 The Author(s). Published by Taylor & Francis.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License ( http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way.

                History
                : 17 April 2018
                : 27 April 2018
                Page count
                Figures: 2, References: 32, Pages: 7
                Funding
                Funded by: Max Planck Society 10.13039/501100004189
                Funded by: Grant-in Aid for Scientific Research on the JSPS
                This work was supported by a core grant from the Max Planck Society to G.C. and by the Grant-in Aid for Scientific Research on the JSPS to T.M.
                Categories
                Short Communication

                Plant science & Botany
                photoperiodic flowering,circadian clock,pharbitis nil,pnlhy,pntoc1,pnfkf1,pncdf2,pn ft
                Plant science & Botany
                photoperiodic flowering, circadian clock, pharbitis nil, pnlhy, pntoc1, pnfkf1, pncdf2, pn ft

                Comments

                Comment on this article