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      Network Receptive Field Modeling Reveals Extensive Integration and Multi-feature Selectivity in Auditory Cortical Neurons

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          Abstract

          Cortical sensory neurons are commonly characterized using the receptive field, the linear dependence of their response on the stimulus. In primary auditory cortex neurons can be characterized by their spectrotemporal receptive fields, the spectral and temporal features of a sound that linearly drive a neuron. However, receptive fields do not capture the fact that the response of a cortical neuron results from the complex nonlinear network in which it is embedded. By fitting a nonlinear feedforward network model (a network receptive field) to cortical responses to natural sounds, we reveal that primary auditory cortical neurons are sensitive over a substantially larger spectrotemporal domain than is seen in their standard spectrotemporal receptive fields. Furthermore, the network receptive field, a parsimonious network consisting of 1–7 sub-receptive fields that interact nonlinearly, consistently better predicts neural responses to auditory stimuli than the standard receptive fields. The network receptive field reveals separate excitatory and inhibitory sub-fields with different nonlinear properties, and interaction of the sub-fields gives rise to important operations such as gain control and conjunctive feature detection. The conjunctive effects, where neurons respond only if several specific features are present together, enable increased selectivity for particular complex spectrotemporal structures, and may constitute an important stage in sound recognition. In conclusion, we demonstrate that fitting auditory cortical neural responses with feedforward network models expands on simple linear receptive field models in a manner that yields substantially improved predictive power and reveals key nonlinear aspects of cortical processing, while remaining easy to interpret in a physiological context.

          Author Summary

          Linear filter descriptions of sensory neurons have been with us since the 1970s, and have been enormously influential. But such models, and more recent nonlinear variants, are rather like modeling the entire network as a single neuron, failing to account for the neuron's response being a consequence of a network of many nonlinear units. Here we show how these limitations can be overcome by using recent advances in machine learning to fit “network receptive field models” to neural responses to natural sounds. Feedforward networks of 1–7 nonlinearly-interacting lower-order model neurons are required to model a cortical receptive field. Each lower order neuron is tuned to somewhat different stimulus features, arranged together in complex but interpretable structures, which cover a far wider range of sound frequencies and delays than current receptive field models indicate. The NRF models capture important nonlinear functional characteristics in auditory cortical neurons, including multiplicative gain control and conjunctive feature selectivity, where neurons respond when certain features are present together but not in isolation. This enables NRFs to predict the responses of auditory cortical neurons with considerably greater accuracy than conventional models.

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          Most cited references54

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          Spatio-temporal correlations and visual signalling in a complete neuronal population.

          Statistical dependencies in the responses of sensory neurons govern both the amount of stimulus information conveyed and the means by which downstream neurons can extract it. Although a variety of measurements indicate the existence of such dependencies, their origin and importance for neural coding are poorly understood. Here we analyse the functional significance of correlated firing in a complete population of macaque parasol retinal ganglion cells using a model of multi-neuron spike responses. The model, with parameters fit directly to physiological data, simultaneously captures both the stimulus dependence and detailed spatio-temporal correlations in population responses, and provides two insights into the structure of the neural code. First, neural encoding at the population level is less noisy than one would expect from the variability of individual neurons: spike times are more precise, and can be predicted more accurately when the spiking of neighbouring neurons is taken into account. Second, correlations provide additional sensory information: optimal, model-based decoding that exploits the response correlation structure extracts 20% more information about the visual scene than decoding under the assumption of independence, and preserves 40% more visual information than optimal linear decoding. This model-based approach reveals the role of correlated activity in the retinal coding of visual stimuli, and provides a general framework for understanding the importance of correlated activity in populations of neurons.
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            Rapid task-related plasticity of spectrotemporal receptive fields in primary auditory cortex.

            We investigated the hypothesis that task performance can rapidly and adaptively reshape cortical receptive field properties in accord with specific task demands and salient sensory cues. We recorded neuronal responses in the primary auditory cortex of behaving ferrets that were trained to detect a target tone of any frequency. Cortical plasticity was quantified by measuring focal changes in each cell's spectrotemporal response field (STRF) in a series of passive and active behavioral conditions. STRF measurements were made simultaneously with task performance, providing multiple snapshots of the dynamic STRF during ongoing behavior. Attending to a specific target frequency during the detection task consistently induced localized facilitative changes in STRF shape, which were swift in onset. Such modulatory changes may enhance overall cortical responsiveness to the target tone and increase the likelihood of 'capturing' the attended target during the detection task. Some receptive field changes persisted for hours after the task was over and hence may contribute to long-term sensory memory.
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              Linearity and normalization in simple cells of the macaque primary visual cortex.

              Simple cells in the primary visual cortex often appear to compute a weighted sum of the light intensity distribution of the visual stimuli that fall on their receptive fields. A linear model of these cells has the advantage of simplicity and captures a number of basic aspects of cell function. It, however, fails to account for important response nonlinearities, such as the decrease in response gain and latency observed at high contrasts and the effects of masking by stimuli that fail to elicit responses when presented alone. To account for these nonlinearities we have proposed a normalization model, which extends the linear model to include mutual shunting inhibition among a large number of cortical cells. Shunting inhibition is divisive, and its effect in the model is to normalize the linear responses by a measure of stimulus energy. To test this model we performed extracellular recordings of simple cells in the primary visual cortex of anesthetized macaques. We presented large stimulus sets consisting of (1) drifting gratings of various orientations and spatiotemporal frequencies; (2) plaids composed of two drifting gratings; and (3) gratings masked by full-screen spatiotemporal white noise. We derived expressions for the model predictions and fitted them to the physiological data. Our results support the normalization model, which accounts for both the linear and the nonlinear properties of the cells. An alternative model, in which the linear responses are subject to a compressive nonlinearity, did not perform nearly as well.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS Comput Biol
                PLoS Comput. Biol
                plos
                ploscomp
                PLoS Computational Biology
                Public Library of Science (San Francisco, CA USA )
                1553-734X
                1553-7358
                11 November 2016
                November 2016
                : 12
                : 11
                : e1005113
                Affiliations
                [1 ]Dept. of Physiology, Anatomy and Genetics (DPAG), Sherrington Building, University of Oxford, United Kingdom
                [2 ]Institute of Biomedical Engineering, Department of Engineering Science, Old Road Campus Research Building, University of Oxford, Headington, United Kingdom
                [3 ]Bio-Inspired Information Processing, Technische Universität München, Germany
                [4 ]Department of Biomedical Science, City University of Hong Kong, Kowloon Tong, Hong Kong
                Hebrew University of Jerusalem, ISRAEL
                Author notes

                The authors have declared that no competing interests exist.

                • Conceptualization: NSH.

                • Data curation: BDBW NSH.

                • Formal analysis: OS NSH BDBW.

                • Funding acquisition: AJK JWHS ZC.

                • Investigation: BDBW NSH.

                • Methodology: NSH OS BDBW.

                • Project administration: AJK ZC JWHS.

                • Resources: AJK ZC JWHS.

                • Software: OS NSH BDBW.

                • Supervision: NSH BDBW JWHS AJK ZC.

                • Validation: OS NSH.

                • Visualization: NSH OS.

                • Writing – original draft: NSH OS.

                • Writing – review & editing: NSH JWHS BDBW AJK OS.

                Author information
                http://orcid.org/0000-0002-7182-2429
                Article
                PCOMPBIOL-D-15-02079
                10.1371/journal.pcbi.1005113
                5105998
                27835647
                05676ed1-4d71-47d2-a3a5-03f782c30365
                © 2016 Harper et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 12 December 2015
                : 22 August 2016
                Page count
                Figures: 5, Tables: 0, Pages: 30
                Funding
                Funded by: funder-id http://dx.doi.org/10.13039/100004440, Wellcome Trust;
                Award ID: WT108369/Z/2015/Z
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/501100000268, Biotechnology and Biological Sciences Research Council;
                Award ID: BB/H008608/1
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100004440, Wellcome Trust;
                Award ID: 082692
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100004440, Wellcome Trust;
                Award ID: WT076508AIA
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/501100004350, Studienstiftung des Deutschen Volkes;
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/501100000703, Action on Hearing Loss;
                Award ID: PA07
                Award Recipient :
                NSH was supported by a Sir Henry Wellcome Postdoctoral Fellowship (grant number WT082692) and other Wellcome Trust funding (grant numbers WT076508AIA and WT108369/Z/2015/Z), by the Department of Physiology, Anatomy and Genetics at the University of Oxford, by Action on Hearing Loss (grant number PA07), and by the Biotechnology and Biological Sciences Research Council (grant number BB/H008608/1). OS was supported by the German Academic Scholarship Foundation. ZC was supported by the Biotechnology and Biological Sciences Research Council (grant number BB/H008608/1). AJK and BDBW were supported by a Wellcome Trust Principal Research Fellowship to AJK (grant number WT076508AIA and WT108369/Z/2015/Z). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
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