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      Radiomic Features From Multi-Parameter MRI Combined With Clinical Parameters Predict Molecular Subgroups in Patients With Medulloblastoma

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          Abstract

          The 2016 WHO classification of central nervous system tumors has included four molecular subgroups under medulloblastoma (MB) as sonic hedgehog (SHH), wingless (WNT), Grade 3, and Group 4. We aimed to develop machine learning models for predicting MB molecular subgroups based on multi-parameter magnetic resonance imaging (MRI) radiomics, tumor locations, and clinical factors. A total of 122 MB patients were enrolled retrospectively. After selecting robust, non-redundant, and relevant features from 5,529 extracted radiomics features, a random forest model was constructed based on a training cohort ( n = 92) and evaluated on a testing cohort ( n = 30). By combining radiographic features and clinical parameters, two combined prediction models were also built. The subgroup can be classified using an 11-feature radiomics model with a high area under the curve (AUC) of 0.8264 for WNT and modest AUCs of 0.6683, 0.6004, and 0.6979 for SHH, Group 3, and Group 4 in the testing cohort, respectively. Incorporating location and hydrocephalus into the radiomics model resulted in improved AUCs of 0.8403 and 0.8317 for WNT and SHH, respectively. After adding gender and age, the AUCs for WNT and SHH were further improved to 0.9097 and 0.8654, while the accuracies were 70 and 86.67% for Group 3 and Group 4, respectively. Prediction performance was excellent for WNT and SHH, while that for Group 3 and Group 4 needs further improvements. Machine learning algorithms offer potentials to non-invasively predict the molecular subgroups of MB.

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            The 2016 World Health Organization Classification of Tumors of the Central Nervous System: a summary.

            The 2016 World Health Organization Classification of Tumors of the Central Nervous System is both a conceptual and practical advance over its 2007 predecessor. For the first time, the WHO classification of CNS tumors uses molecular parameters in addition to histology to define many tumor entities, thus formulating a concept for how CNS tumor diagnoses should be structured in the molecular era. As such, the 2016 CNS WHO presents major restructuring of the diffuse gliomas, medulloblastomas and other embryonal tumors, and incorporates new entities that are defined by both histology and molecular features, including glioblastoma, IDH-wildtype and glioblastoma, IDH-mutant; diffuse midline glioma, H3 K27M-mutant; RELA fusion-positive ependymoma; medulloblastoma, WNT-activated and medulloblastoma, SHH-activated; and embryonal tumour with multilayered rosettes, C19MC-altered. The 2016 edition has added newly recognized neoplasms, and has deleted some entities, variants and patterns that no longer have diagnostic and/or biological relevance. Other notable changes include the addition of brain invasion as a criterion for atypical meningioma and the introduction of a soft tissue-type grading system for the now combined entity of solitary fibrous tumor / hemangiopericytoma-a departure from the manner by which other CNS tumors are graded. Overall, it is hoped that the 2016 CNS WHO will facilitate clinical, experimental and epidemiological studies that will lead to improvements in the lives of patients with brain tumors.
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              Comparing the Areas under Two or More Correlated Receiver Operating Characteristic Curves: A Nonparametric Approach

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                Author and article information

                Contributors
                Journal
                Front Oncol
                Front Oncol
                Front. Oncol.
                Frontiers in Oncology
                Frontiers Media S.A.
                2234-943X
                02 October 2020
                2020
                : 10
                : 558162
                Affiliations
                [1] 1Department of MRI, The First Affiliated Hospital of Zhengzhou University , Zhengzhou, China
                [2] 2Institute of Biomedical and Health Engineering, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences , Shenzhen, China
                [3] 3Department of Pathology, The First Affiliated Hospital of Zhengzhou University , Zhengzhou, China
                [4] 4Department of Anatomical and Cellular Pathology, Prince of Wales Hospital, The Chinese University of Hong Kong , Hong Kong, China
                [5] 5Department of Neurosurgery, The First Affiliated Hospital of Zhengzhou University , Zhengzhou, China
                [6] 6Center for Language and Brain, Shenzhen Institute of Neuroscience , Shenzhen, China
                [7] 7Shenzhen Key Laboratory of Affective and Social Neuroscience, Center for Brain Disorders and Cognitive Sciences, Shenzhen University , Shenzhen, China
                [8] 8Department of Biomedical Sciences of Cells and Systems, University of Groningen, University Medical Center Groningen , Groningen, Netherlands
                Author notes

                Edited by: Jiuquan Zhang, Chongqing University, China

                Reviewed by: Wei Wei, Xi’an Polytechnic University, China; Vijay Ramaswamy, Hospital for Sick Children, Canada

                *Correspondence: Zhenyu Zhang, fcczhangzy1@ 123456zzu.edu.cn

                These authors have contributed equally to this work

                This article was submitted to Cancer Imaging and Image-directed Interventions, a section of the journal Frontiers in Oncology

                Article
                10.3389/fonc.2020.558162
                7566191
                33117690
                046d7f08-72f8-48dc-9722-b9eccf5132ee
                Copyright © 2020 Yan, Liu, Wang, Zhao, Li, Li, Wang, Yuan, Geng, Zhang, Liu, Duan, Zhan, Pei, Zhao, Sun, Sun, Wang, Hong, Wang, Guo, Li, Cheng, Liu, Ng, Li and Zhang.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 12 May 2020
                : 01 September 2020
                Page count
                Figures: 4, Tables: 4, Equations: 0, References: 35, Pages: 11, Words: 0
                Funding
                Funded by: National Natural Science Foundation of China 10.13039/501100001809
                Award ID: 81702465
                Award ID: 61571432
                Award ID: U1804172
                Categories
                Oncology
                Original Research

                Oncology & Radiotherapy
                medulloblastoma,radiomics,molecular subgroups,machine learning,prediction
                Oncology & Radiotherapy
                medulloblastoma, radiomics, molecular subgroups, machine learning, prediction

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