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      Integrating Biochar, Bacteria, and Plants for Sustainable Remediation of Soils Contaminated with Organic Pollutants

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          Abstract

          The contamination of soil with organic pollutants has been accelerated by agricultural and industrial development and poses a major threat to global ecosystems and human health. Various chemical and physical techniques have been developed to remediate soils contaminated with organic pollutants, but challenges related to cost, efficacy, and toxic byproducts often limit their sustainability. Fortunately, phytoremediation, achieved through the use of plants and associated microbiomes, has shown great promise for tackling environmental pollution; this technology has been tested both in the laboratory and in the field. Plant–microbe interactions further promote the efficacy of phytoremediation, with plant growth-promoting bacteria (PGPB) often used to assist the remediation of organic pollutants. However, the efficiency of microbe-assisted phytoremediation can be impeded by (i) high concentrations of secondary toxins, (ii) the absence of a suitable sink for these toxins, (iii) nutrient limitations, (iv) the lack of continued release of microbial inocula, and (v) the lack of shelter or porous habitats for planktonic organisms. In this regard, biochar affords unparalleled positive attributes that make it a suitable bacterial carrier and soil health enhancer. We propose that several barriers can be overcome by integrating plants, PGPB, and biochar for the remediation of organic pollutants in soil. Here, we explore the mechanisms by which biochar and PGPB can assist plants in the remediation of organic pollutants in soils, and thereby improve soil health. We analyze the cost-effectiveness, feasibility, life cycle, and practicality of this integration for sustainable restoration and management of soil.

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          Biofilms: an emergent form of bacterial life.

          Bacterial biofilms are formed by communities that are embedded in a self-produced matrix of extracellular polymeric substances (EPS). Importantly, bacteria in biofilms exhibit a set of 'emergent properties' that differ substantially from free-living bacterial cells. In this Review, we consider the fundamental role of the biofilm matrix in establishing the emergent properties of biofilms, describing how the characteristic features of biofilms - such as social cooperation, resource capture and enhanced survival of exposure to antimicrobials - all rely on the structural and functional properties of the matrix. Finally, we highlight the value of an ecological perspective in the study of the emergent properties of biofilms, which enables an appreciation of the ecological success of biofilms as habitat formers and, more generally, as a bacterial lifestyle.
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            Biochar effects on soil biota – A review

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              Induced systemic resistance by beneficial microbes.

              Beneficial microbes in the microbiome of plant roots improve plant health. Induced systemic resistance (ISR) emerged as an important mechanism by which selected plant growth-promoting bacteria and fungi in the rhizosphere prime the whole plant body for enhanced defense against a broad range of pathogens and insect herbivores. A wide variety of root-associated mutualists, including Pseudomonas, Bacillus, Trichoderma, and mycorrhiza species sensitize the plant immune system for enhanced defense without directly activating costly defenses. This review focuses on molecular processes at the interface between plant roots and ISR-eliciting mutualists, and on the progress in our understanding of ISR signaling and systemic defense priming. The central role of the root-specific transcription factor MYB72 in the onset of ISR and the role of phytohormones and defense regulatory proteins in the expression of ISR in aboveground plant parts are highlighted. Finally, the ecological function of ISR-inducing microbes in the root microbiome is discussed.
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                Author and article information

                Journal
                Environ Sci Technol
                Environ Sci Technol
                es
                esthag
                Environmental Science & Technology
                American Chemical Society
                0013-936X
                1520-5851
                27 October 2022
                06 December 2022
                : 56
                : 23
                : 16546-16566
                Affiliations
                []CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences , Nanjing 210008, China
                []University of Chinese Academy of Sciences , Beijing 100049, China
                [§ ]Department of Environmental Horticulture, Royal Horticultural Society , Wisley, Surrey GU23 6QB, U.K.
                []Department of Renewable Resources, University of Alberta , Edmonton, Alberta T6G 2R3, Canada
                []College of Food Science, Northeast Agricultural University , Harbin, Heilongjiang 150030, China
                []Department of Agroenvironment and Ecology, Agricultural University of Tirana , Tirana 1029, Albania
                [@ ]School of Agriculture and Environment, The UWA Institute of Agriculture, The University of Western Australia , Perth, Western Australia 6001, Australia
                []Korea Biochar Research Center, APRU Sustainable Waste Management Program & Division of Environmental Science and Ecological Engineering, Korea University , Seoul 02841, Republic of Korea
                []Department of Soil and Groundwater Management, Bergische Universität , 42285 Wuppertal, Germany
                []Institute for Environmental Research, RWTH Aachen University , 52074 Aachen, Germany
                []Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences , Xiamen 361021, China
                []State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences , Beijing 100085, China
                []Center for Microbial Ecology, Department of Plant, Soil and Microbial Sciences, Michigan State University , East Lansing, Michigan 48824, United States
                []Stockbridge School of Agriculture, University of Massachusetts , Amherst, Massachusetts 01003, United States
                []Zhejiang University , Hangzhou 310058, China
                []School of the Environment, State Key Laboratory of Pollution Control and Resource Reuse, Nanjing University , 210023 Nanjing, China
                []Key Laboratory of the Three Gorges Reservoir Region’s Eco-Environment, Chongqing University , 400045 Chongqing, China
                Author notes
                Author information
                https://orcid.org/0000-0001-9986-0948
                https://orcid.org/0000-0002-7624-439X
                https://orcid.org/0000-0003-2056-1692
                https://orcid.org/0000-0003-3401-0912
                https://orcid.org/0000-0001-7404-1639
                https://orcid.org/0000-0003-3861-8482
                https://orcid.org/0000-0003-2028-1295
                Article
                10.1021/acs.est.2c02976
                9730858
                36301703
                b4b7aba0-dbb7-4b5e-8ce0-bd1f10935078
                © 2022 The Authors. Published by American Chemical Society

                Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works ( https://creativecommons.org/licenses/by-nc-nd/4.0/).

                History
                : 26 April 2022
                : 28 September 2022
                : 28 September 2022
                Funding
                Funded by: Alexander von Humboldt-Stiftung, doi 10.13039/100005156;
                Award ID: NA
                Funded by: Natural Science Foundation of Jiangsu Province, doi 10.13039/501100004608;
                Award ID: BK20150050
                Funded by: Natural Science Foundation of Jiangsu Province, doi 10.13039/501100004608;
                Award ID: BK20201106
                Funded by: Ministry of Science and Technology of the People''s Republic of China, doi 10.13039/501100002855;
                Award ID: 2020YFC1807000
                Funded by: Ministry of Science and Technology of the People''s Republic of China, doi 10.13039/501100002855;
                Award ID: 2019YFC1804203
                Funded by: Ministry of Science and Technology of the People''s Republic of China, doi 10.13039/501100002855;
                Award ID: 2018YFC1800400
                Funded by: Chinese Academy of Sciences, doi 10.13039/501100002367;
                Award ID: XDA28030501
                Funded by: Chinese Academy of Sciences, doi 10.13039/501100002367;
                Award ID: QYZDJ-SSW-DQC035
                Funded by: National Natural Science Foundation of China, doi 10.13039/501100001809;
                Award ID: 42007145
                Funded by: National Natural Science Foundation of China, doi 10.13039/501100001809;
                Award ID: 41991333
                Funded by: National Natural Science Foundation of China, doi 10.13039/501100001809;
                Award ID: 41977137
                Funded by: Michigan State University, doi 10.13039/100007709;
                Award ID: NA
                Categories
                Critical Review
                Custom metadata
                es2c02976
                es2c02976

                General environmental science
                biochar,organic pollutants,phytoremediation,plant growth-promoting bacteria,soil pollution

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