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      WNT signaling modulates PD-L1 expression in the stem cell compartment of triple-negative breast cancer

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          Abstract

          Triple-negative breast cancers (TNBCs) are characterized by a poor prognosis and lack of targeted treatments, and thus, new therapeutic strategies are urgently needed. Inhibitors against programmed death-1 (PD-1)/PD-1 ligand (PD-L1) have shown significant efficacy in various solid cancers, but their activity against TNBCs remains limited. Here, we report that human TNBCs molecularly stratified for high levels of PD-L1 (PD-L1 High) showed significantly enriched expression of immune and cancer stemness pathways compared with those with low PD-L1 expression (PD-L1 Low). In addition, the PD-L1 High cases were significantly associated with a high stemness score (SS High) signature. TNBC cell lines gated for aldehyde dehydrogenase (ALDH) and CD44 stemness markers exhibited increased levels of PD-L1 versus their ALDH-negative and CD44 Low counterparts, and PD-L1 High cells generated significantly more mammospheres than PD-L1 Low cells. Murine mammary SCA-1-positive tumor cells with PD-L1 High expression generated tumors in vivo with higher efficacy than PD-L1 Low cells. Furthermore, treatment of TNBC cells with selective WNT inhibitors or activators downregulated or upregulated PD-L1 expression, respectively, implying a functional cross-talk between WNT activity and PD-L1 expression. Remarkably, human TNBC samples contained tumor elements co-expressing PD-L1 with ALDH1A1 and/or CD44v6. Additionally, both PD-L1-/SCA1-positive and ALDH1A1-positive tumor elements were found in close contact with CD3-, and PD-1-positive T cells in murine and human tumor samples. Overall, our study suggests that PD-L1-positive tumor elements with a stemness phenotype may participate in the complex dynamics of TNBC-related immune evasion, which might be targeted through WNT signaling inhibition.

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          Gene Ontology: tool for the unification of biology

          Genomic sequencing has made it clear that a large fraction of the genes specifying the core biological functions are shared by all eukaryotes. Knowledge of the biological role of such shared proteins in one organism can often be transferred to other organisms. The goal of the Gene Ontology Consortium is to produce a dynamic, controlled vocabulary that can be applied to all eukaryotes even as knowledge of gene and protein roles in cells is accumulating and changing. To this end, three independent ontologies accessible on the World-Wide Web (http://www.geneontology.org) are being constructed: biological process, molecular function and cellular component.
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            The blockade of immune checkpoints in cancer immunotherapy.

            Among the most promising approaches to activating therapeutic antitumour immunity is the blockade of immune checkpoints. Immune checkpoints refer to a plethora of inhibitory pathways hardwired into the immune system that are crucial for maintaining self-tolerance and modulating the duration and amplitude of physiological immune responses in peripheral tissues in order to minimize collateral tissue damage. It is now clear that tumours co-opt certain immune-checkpoint pathways as a major mechanism of immune resistance, particularly against T cells that are specific for tumour antigens. Because many of the immune checkpoints are initiated by ligand-receptor interactions, they can be readily blocked by antibodies or modulated by recombinant forms of ligands or receptors. Cytotoxic T-lymphocyte-associated antigen 4 (CTLA4) antibodies were the first of this class of immunotherapeutics to achieve US Food and Drug Administration (FDA) approval. Preliminary clinical findings with blockers of additional immune-checkpoint proteins, such as programmed cell death protein 1 (PD1), indicate broad and diverse opportunities to enhance antitumour immunity with the potential to produce durable clinical responses.
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              Pan-cancer Immunogenomic Analyses Reveal Genotype-Immunophenotype Relationships and Predictors of Response to Checkpoint Blockade.

              The Cancer Genome Atlas revealed the genomic landscapes of human cancers. In parallel, immunotherapy is transforming the treatment of advanced cancers. Unfortunately, the majority of patients do not respond to immunotherapy, making the identification of predictive markers and the mechanisms of resistance an area of intense research. To increase our understanding of tumor-immune cell interactions, we characterized the intratumoral immune landscapes and the cancer antigenomes from 20 solid cancers and created The Cancer Immunome Atlas (https://tcia.at/). Cellular characterization of the immune infiltrates showed that tumor genotypes determine immunophenotypes and tumor escape mechanisms. Using machine learning, we identified determinants of tumor immunogenicity and developed a scoring scheme for the quantification termed immunophenoscore. The immunophenoscore was a superior predictor of response to anti-cytotoxic T lymphocyte antigen-4 (CTLA-4) and anti-programmed cell death protein 1 (anti-PD-1) antibodies in two independent validation cohorts. Our findings and this resource may help inform cancer immunotherapy and facilitate the development of precision immuno-oncology.
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                Author and article information

                Contributors
                +39.02.23902506 , massimo.dinicola@istitutotumori.mi.it
                +39.02.2390.2573 , serenella.pupa@istitutotumori.mi.it
                Journal
                Oncogene
                Oncogene
                Oncogene
                Nature Publishing Group UK (London )
                0950-9232
                1476-5594
                31 January 2019
                31 January 2019
                2019
                : 38
                : 21
                : 4047-4060
                Affiliations
                [1 ]ISNI 0000 0001 0807 2568, GRID grid.417893.0, Molecular Targeting Unit, Department of Research, , Fondazione IRCCS Istituto Nazionale dei Tumori di Milano, ; Milan, Italy
                [2 ]ISNI 0000 0004 1762 5517, GRID grid.10776.37, Tumor Immunology Unit, Department of Health Science, Human Pathology Section, , University of Palermo School of Medicine, ; Palermo, Italy
                [3 ]ISNI 0000 0001 0807 2568, GRID grid.417893.0, Molecular Immunology Unit, Department of Research, , Fondazione IRCCS Istituto Nazionale dei Tumori di Milano, ; Milan, Italy
                [4 ]ISNI 0000 0001 0807 2568, GRID grid.417893.0, Unit of Immunotherapy and Anticancer Innovative Therapeutics, Department of Medical Oncology and Hematology, , Fondazione IRCCS Istituto Nazionale dei Tumori di Milano, ; Milan, Italy
                [5 ]ISNI 0000 0004 0627 7633, GRID grid.452651.1, Cancer Genomics Laboratory, , National Institute of Genomic Medicine, ; Mexico City, Mexico
                Author information
                http://orcid.org/0000-0002-7644-9969
                http://orcid.org/0000-0003-2315-3977
                Article
                700
                10.1038/s41388-019-0700-2
                6755989
                30705400
                c7fbed84-da5b-49ff-8660-1ec62072b598
                © The Author(s) 2019

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 5 May 2018
                : 3 December 2018
                : 7 December 2018
                Funding
                Funded by: Associazione Italiana Ricerca Cancro (AIRC) - IG16918
                Funded by: S.L. Cordoba-Romero received the Postdoctoral fellowship “Estancias Posdoctorales en el Extranjero Vinculadas a la Consolidación de Grupos de Investigatioción y Fortalecimiento del Posgrado Nacional” from the Mexican National Council of Science and Technology (CVU 363453)
                Funded by: Fondazione IRCCS Istituto Nazionale dei Tumori - Ricerca Strategica Istituzionale call 2016
                Categories
                Article
                Custom metadata
                © The Author(s), under exclusive licence to Springer Nature Limited 2019

                Oncology & Radiotherapy
                cell biology,stem cells,immunology
                Oncology & Radiotherapy
                cell biology, stem cells, immunology

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