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      Geometric formalism for DNA quadruplex folding.

      Chemistry (Weinheim an Der Bergstrasse, Germany)
      G-Quadruplexes, Models, Molecular, Nucleic Acid Conformation

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          Abstract

          Understanding the control of self-assembly and stereochemical properties of DNA higher order architectural folds is of fundamental importance in biology as well as biochemical technological applications. Guanine-rich DNA sequences can form tetrahelical architectures termed quadruplexes. A formalism is presented describing the interdependency of a set of structural descriptors as a geometric basis for folding of unimolecular quadruplex topologies. It represents a standard for interpretation of structural characteristics of quadruplexes, and is comprehensive in explicitly harmonizing the results of published literature with a unified language. The formalism is a fundamental step towards prediction of unimolecular quadruplex folding topologies from primary sequence.

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          Author and article information

          Journal
          17972263
          10.1002/chem.200701255

          Chemistry
          G-Quadruplexes,Models, Molecular,Nucleic Acid Conformation
          Chemistry
          G-Quadruplexes, Models, Molecular, Nucleic Acid Conformation

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