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      Characteristics and comprehensiveness of adult HIV care and treatment programmes in Asia-Pacific, sub-Saharan Africa and the Americas: results of a site assessment conducted by the International epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration

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          Abstract

          Introduction

          HIV care and treatment programmes worldwide are transforming as they push to deliver universal access to essential prevention, care and treatment services to persons living with HIV and their communities. The characteristics and capacity of these HIV programmes affect patient outcomes and quality of care. Despite the importance of ensuring optimal outcomes, few studies have addressed the capacity of HIV programmes to deliver comprehensive care. We sought to describe such capacity in HIV programmes in seven regions worldwide.

          Methods

          Staff from 128 sites in 41 countries participating in the International epidemiologic Databases to Evaluate AIDS completed a site survey from 2009 to 2010, including sites in the Asia-Pacific region ( n=20), Latin America and the Caribbean ( n=7), North America ( n=7), Central Africa ( n=12), East Africa ( n=51), Southern Africa ( n=16) and West Africa ( n=15). We computed a measure of the comprehensiveness of care based on seven World Health Organization-recommended essential HIV services.

          Results

          Most sites reported serving urban (61%; region range (rr): 33–100%) and both adult and paediatric populations (77%; rr: 29–96%). Only 45% of HIV clinics that reported treating children had paediatricians on staff. As for the seven essential services, survey respondents reported that CD4+ cell count testing was available to all but one site, while tuberculosis (TB) screening and community outreach services were available in 80 and 72%, respectively. The remaining four essential services – nutritional support (82%), combination antiretroviral therapy adherence support (88%), prevention of mother-to-child transmission (PMTCT) (94%) and other prevention and clinical management services (97%) – were uniformly available. Approximately half (46%) of sites reported offering all seven services. Newer sites and sites in settings with low rankings on the UN Human Development Index (HDI), especially those in the President's Emergency Plan for AIDS Relief focus countries, tended to offer a more comprehensive array of essential services. HIV care programme characteristics and comprehensiveness varied according to the number of years the site had been in operation and the HDI of the site setting, with more recently established clinics in low-HDI settings reporting a more comprehensive array of available services. Survey respondents frequently identified contact tracing of patients, patient outreach, nutritional counselling, onsite viral load testing, universal TB screening and the provision of isoniazid preventive therapy as unavailable services.

          Conclusions

          This study serves as a baseline for on-going monitoring of the evolution of care delivery over time and lays the groundwork for evaluating HIV treatment outcomes in relation to site capacity for comprehensive care.

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          Most cited references26

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          Mortality of Patients Lost to Follow-Up in Antiretroviral Treatment Programmes in Resource-Limited Settings: Systematic Review and Meta-Analysis

          Background The retention of patients in antiretroviral therapy (ART) programmes is an important issue in resource-limited settings. Loss to follow up can be substantial, but it is unclear what the outcomes are in patients who are lost to programmes. Methods and Findings We searched the PubMed, EMBASE, Latin American and Caribbean Health Sciences Literature (LILACS), Indian Medlars Centre (IndMed) and African Index Medicus (AIM) databases and the abstracts of three conferences for studies that traced patients lost to follow up to ascertain their vital status. Main outcomes were the proportion of patients traced, the proportion found to be alive and the proportion that had died. Where available, we also examined the reasons why some patients could not be traced, why patients found to be alive did not return to the clinic, and the causes of death. We combined mortality data from several studies using random-effects meta-analysis. Seventeen studies were eligible. All were from sub-Saharan Africa, except one study from India, and none were conducted in children. A total of 6420 patients (range 44 to 1343 patients) were included. Patients were traced using telephone calls, home visits and through social networks. Overall the vital status of 4021 patients could be ascertained (63%, range across studies: 45% to 86%); 1602 patients had died. The combined mortality was 40% (95% confidence interval 33%–48%), with substantial heterogeneity between studies (P<0.0001). Mortality in African programmes ranged from 12% to 87% of patients lost to follow-up. Mortality was inversely associated with the rate of loss to follow up in the programme: it declined from around 60% to 20% as the percentage of patients lost to the programme increased from 5% to 50%. Among patients not found, telephone numbers and addresses were frequently incorrect or missing. Common reasons for not returning to the clinic were transfer to another programme, financial problems and improving or deteriorating health. Causes of death were available for 47 deaths: 29 (62%) died of an AIDS defining illness. Conclusions In ART programmes in resource-limited settings a substantial minority of adults lost to follow up cannot be traced, and among those traced 20% to 60% had died. Our findings have implications both for patient care and the monitoring and evaluation of programmes.
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            Mortality of HIV-Infected Patients Starting Antiretroviral Therapy in Sub-Saharan Africa: Comparison with HIV-Unrelated Mortality

            Introduction The widespread use since 1996 of highly active antiretroviral therapy (ART) has substantially improved the prognosis of HIV-infected patients both in industrialised and low-income settings [1]. Recent studies from industrialised countries have suggested that all-cause mortality in patients successfully treated with ART might approach that of the general population, and that in many patients mortality rates are comparable to those associated with other chronic conditions, such as diabetes [2]–[6]. Such comparisons are important to gain a better understanding of the treated history of HIV infection, to monitor and predict the progress of the HIV/AIDS epidemic, and to plan health services in the era of potent ART. As a result of scaling up of ART in low- and middle-income countries, 2.99 million people living with HIV/AIDS were estimated to be receiving treatment at the end of 2007, representing 31% of the estimated 9.6 million people in urgent need of treatment in these countries [7]. In sub-Saharan Africa, the number of patients on combination ART increased from 1.38 million to 2.12 million from 2006 to 2007. Although the immunological and virological responses to treatment in resource-limited countries can equal that in high-income settings [1],[8]–[10], mortality of patients starting ART has been substantially higher than in industrialised countries, particularly in the first few months of treatment [1],[10],[11]. To our knowledge, no studies have compared mortality among HIV-infected people starting ART in sub-Saharan Africa with the non-HIV–related background mortality. We analysed data from a network of treatment programmes in sub-Saharan Africa to compare mortality rates observed in HIV-1–infected patients starting ART with non-HIV–related mortality in four countries in sub-Saharan Africa. Methods The International Epidemiological Databases to Evaluate AIDS Analyses were based on cohorts participating in the West African and Southern African regions of the International epidemiological Databases to Evaluate AIDS (IeDEA) [12]. The databases are regularly updated; the November 2007 version was used for the present analysis. We restricted analyses to five large treatment programmes in four sub-Saharan African countries, including two treatment programmes in townships in the greater Cape Town metropolitan area, Khayelitsha [9] and Gugulethu [13], South Africa; the Lighthouse clinic in Lilongwe, Malawi [14]; the Centre de Prise en Charge de Recherches et de Formation (CEPREF)/Agence National de Recherches sur le Sida (ANRS) 1203 cohort from Abidjan, Côte d'Ivoire [15]; and the Connaught Clinic in Harare, Zimbabwe [16]. All patients aged 16 y or older who were ART-naïve at the start of ART were included. ART was defined as any combination of three antiretroviral drugs. Loss to follow-up was assumed in patients who were not known to have died and who were not seen for at least 1 y before closing the database for the present analysis. The local Ethics Committees of all clinics approved participation in IeDEA, which was also approved by the Cantonal Ethics Committee in Bern, Switzerland. Estimates of HIV-Free Background Mortality Country-specific rates of all-cause mortality and HIV-free mortality by sex and 5-y age groups were obtained from the World Health Organization (WHO) Global Burden of Disease project [17]. Beginning with the year 1999, WHO has been producing annual life tables for all member states. A key use of these tables is the calculation of healthy life expectancy (HALE), the basic indicator of population health published each year in the World Health Report [18]. The methods used to estimate all-cause and cause-specific mortality have been described in detail elsewhere [19],[20]. Briefly, life tables based on vital registration data, corrected for under registration of deaths using demographic techniques, were used to estimate all-cause mortality in South Africa and Zimbabwe. In Côte d'Ivoire and Malawi data from other sources, such as census and surveys, were applied to a modified logit life-table model, using a global standard [20],[21]. For all four countries Joint United Nations Programme on HIVAIDS (UNAIDS) estimates of HIV/AIDS mortality were used, on the basis of epidemiological models and sentinel surveillance data on HIV seroprevalence [22]. Multiple Imputation of Missing Individual Patient Data Information on the CD4 count, clinical stage at the start of ART, and vital status at the last contact date was missing in some patients. Vital status was considered missing if the patient was not known to have died and the last date of information was less than 2 y after starting ART or before the administrative closure date of the cohort, whatever came first. We used multiple imputation by chained equation methods to impute missing information [23]. Multiple imputation included the outcome, i.e., whether or not a patient had died. Baseline CD4 cell count, clinical stage of disease, and survival time after censoring were imputed conditional on each other as well as on age and sex. All prediction equations included cohort, log age at start of ART, and sex. To optimise the imputation procedure we further included available clinical information on baseline viral load, total lymphocyte count, and haemoglobin; since females had lower haemoglobin levels the interaction between haemoglobin and sex was also fitted. Continuous variables were normalised prior to imputation modelling if needed, using log-transformation for age at start of ART and survival time, and square-root transformation for the baseline CD4. Interval censoring was used for baseline CD4 and survival time to ensure imputation values within the appropriate range. To impute survival time we used the complete follow-up history of all patients and used a log distribution to sample survival time after censoring in patients for which no death was recorded. The imputation of log survival time involved left-censoring at the date of last information, but no right-censoring. In the analysis we right-censored survival time at 2 y or at the closure date of the cohort. We created 20 imputed datasets in total. We analyzed imputed datasets using Poisson regression models (see below) to examine the association of time on treatment (months 1–3, 4–6, 7–12, and 13–24 after start of ART) and patient characteristics at baseline as risk factors of relative survival. Estimates of coefficients were derived by averaging, and appropriate standard errors were calculated using the within and between imputation standard errors of the estimates using Rubin's rules [23]. Modelling of Standardised Mortality Ratios and Excess Mortality We quantified mortality of HIV-infected patients on ART relative to the mortality in the general population using excess mortality and standardised mortality ratios (SMRs). The excess mortality risk is derived using an additive model, by subtracting age- and sex-specific HIV-unrelated mortality rates in the reference population from mortality in HIV-infected patients. SMRs are based on a multiplicative model and calculated as the ratio of the number of observed deaths over the expected deaths, using age- and sex-specific rates of HIV-unrelated mortality from the reference population. The SMR thus quantifies how much higher mortality is in HIV-infected patients compared to the reference population, but gives no indication of the excess mortality in absolute terms. Excess mortality and SMRs with 95% confidence intervals (CIs) were obtained from generalised linear models with a Poisson error structure, as described by Dickman and colleagues [24]. The expected number of deaths due to causes other than HIV d* j for observation j was calculated by multiplying the person-time at risk y j by the corresponding sex, age- (in 5-y age groups), and country-specific rates of HIV-free mortality. The excess mortality model assumes piecewise constant hazards λj, implying a Poisson process for the number of deaths d j in each interval. The generalised linear model with Poisson error structure for outcome d j involves offset ln (y j ) and the user-defined link function ln (μ j − d* j ), where μ j  = λj y j. In SMR modelling d j is modelled with offset ln (d* j ). Robust standard errors were used to account for the clustering of data on treatment programme. Significance testing was by Wald tests. Multivariable models were calculated for excess mortality on the 20 imputed datasets. The interpretation of the excess hazard ratios (eHRs) from these models is similar to that of the hazard ratio in the familiar Cox model. For example, an eHR of 0.80 for females relative to males would indicate that females have a 20% lower risk of death as compared to males, after controlling for the variation in background mortality. The following variables were included: age, sex, ART regimen, baseline CD4 cell count, clinical stage of disease, and calendar period of starting ART. Time periods considered were months 1–3, 4–6, 7–12, and 13–24 after start of ART. ART regimen was defined as non-nucleoside reverse transcriptase inhibitor (NNRTI)-based, protease inhibitor (PI)-based, and other. Baseline CD4 count was analysed in five categories (0–24, 25–49, 50–99, 100–199, and 200 or more cells/µl). Clinical stage of disease was defined as less advanced (WHO stage I or stage II) or advanced (WHO stage III or stage IV). In a sensitivity analysis we excluded two sites with high loss to follow-up. All analyses were done in Stata version 10.0 (Stata Corporation), using the “ice” routine for imputation of missing values. Results Treatment Programmes and Patient Characteristics The combined dataset included 13,249 patients. Table 1 describes the five treatment programmes from four sub-Saharan African countries. Patient numbers ranged from 857 patients (Connaught clinic, Zimbabwe) to 4,710 patients (Lighthouse clinic, Malawi). The majority of patients in each of the treatment programmes were women, the median age ranged from 32 to 37 y. The median baseline CD4 cell count ranged from 87 cells/µl in Khayelitsha, South Africa to 131 cells/µl in Abidjan, Côte d'Ivoire, and the proportion with advanced clinical stage of disease (WHO stage III/IV) from 68% (Connaught) to 90% (Khayelitsha). A total of 1,177 deaths were recorded during 14,695 person-years of follow-up. Crude estimates of cumulative mortality at 2 y on ART ranged from 7.4% to 12.3%, and loss to follow-up from 7.1% to 31.7% across programmes. 10.1371/journal.pmed.1000066.t001 Table 1 Description of treatment programmes included in analyses. Programme Country Number of Patients Median Age (IQR) Number of Women (%) Median (IQR) Baseline CD4 (Cells/µl) Number in WHO stage III/IV at Baseline (%a) Number of Patients Lost to Follow-up at 2 y Cumulative Loss to Follow-up (95% CI) at 2 y (%)b Cumulative Mortality (95% CI) at 2-y (%) Crude Following Multiple Imputationc CEPREF Côte d'Ivoire 2,400 35 (30–42) 1,770 (74) 131 (51–217) 1,939 (82) 218 13.7 (12.1–15.6) 10.6 (9.3–12.1) 11.2 (9.7–12.8) Connaught Zimbabwe 857 37 (32–44) 585 (68) 102 (51–159) 263 (68) 33 7.1 (5.1–9.8) 7.4 (5.7–9.6) 7.5 (5.6–9.6) Gugulethu South Africa 1,916 33 (29–39) 1,310 (68) 103 (50–160) 1,528 (80) 62 7.6 (5.9–9.7) 11.1 (9.5–13.1) 11.1 (9.2–12.8) Khayelitsha South Africa 3,366 32 (28–38) 2,353 (70) 87 (35–146) 3,018 (90) 148 7.1 (6.1–8.4) 11.2 (10.1–12.4) 11.3 (10.2–12.5) Lighthouse Malawi 4,710 36 (30–42) 2,813 (60) 126 (54–211) 4,063 (86) 829 31.7 (29.9–33.6) 12.3 (11.1–13.6) 13.2 (11.9–14.4) Combined — 13,249 34 (29–41) 8,831 (67) 107 (46–175) 10,811 (85) 1,290 16.2 (15.4–17.1) 11.1 (10.5–11.8) 11.7 (11.1–12.3) Number of patients (%) unless otherwise indicated. a Percent of patients with known clinical stage at baseline. b Estimated for patients with at least one additional potential year of follow-up until administrative censoring date of the database of their programme. c Outcomes imputed in patients lost to follow-up. CEPREF, Centre de Prise en Charge de Recherches et de Formation/Agence National de Recherches sur le Sida (ANRS) 1203 cohort. Information on the CD4 count and clinical stage at the start of ART was missing for 2,535 patients (19.1%) and 529 patients (4.0%), respectively. Total follow-up time after imputation increased to 17,480 y, and the number of deaths to 1,338. Mortality estimates at 2 y were somewhat higher after imputation for the Centre de Prise en Charge de Recherches et de Formation (CEPREF) and Lighthouse cohorts, but similar to the crude estimates in the other cohorts (Table 1). Patient characteristics at baseline and the effect of multiple imputation of missing information on the distribution of CD4 cell count and clinical stage of disease at baseline are shown in Table 2. At 6 mo, the median CD4 cell count had increased to 245 cells/µl (interquartile range [IQR] 167–347), varying between 220 and 272 cells/µl across programmes. At 12 mo, the median CD4 count was 285 cells/µl (IQR 197–393), ranging from 253 to 307 cells/µl. 10.1371/journal.pmed.1000066.t002 Table 2 Baseline characteristics and mortality over the first 2 y of ART. Category Subcategory Original Data Following Multiple Imputationa n (%) Person-Years n Deaths (%) n (%) Person-Years n Deaths (%) Overall — 13,249 (100) 14,695 1,177 (100) 13,249 (100) 17,480 1,338 (100) Age (y) 16–29 3,436 (26) 3,856 276 (23) 3,436 (26) 4,564 309 (23) — 30–39 5,875 (44) 6,567 521 (44) 5,875 (44) 7,789 594 (44) — 40–49 2,919 (22) 3,232 266 (23) 2,919 (22) 3,851 308 (23) — ≥50 1,019 (8) 1,041 114 (10) 1,019 (8) 1,276 127 (10) Sex Female 8,831 (67) 10,047 701 (60) 8,831 (67) 11,796 789 (59) — Male 4,418 (33) 4,648 476 (40) 4,418 (33) 5,684 549 (41) Initial ART regimen NNRTI-based 11,325 (85) 12,616 1,027 (87) 11,325 (85) 14,969 1162 (87) — PI-based 94 (1) 124 8 (1) 94 (1) 148 9 (1) — Unknown or other 1,830 (14) 1,955 142 (12) 1,830 (14) 2,363 167 (12) Baseline CD4 count (cells/µl) 0.48). The association between the baseline CD4 count and excess mortality became weaker with time on treatment and the interaction was included in estimating excess mortality and SMRs. Excess Mortality Excess mortality declined with time on treatment and increasing baseline CD4 cell count. It was lower in women as compared to men, and higher in patients starting ART with advanced stage of disease (Table 4). Overall excess mortality per 100 person-years was 6.95 (5.95–8.13), varying between 17.51 (14.50–21.14) and 1.00 (0.55–1.81) for patients starting with worst prognosis (CD4 cell count <25 cells/µl and advanced stage of disease) and best prognosis (CD4 cell count ≥200 cells/µl and less advanced stage of disease), respectively. In the second year on ART excess mortality in the patients group with best prognosis was 0.27 (0.08–0.94) per 100 person-years. Figure 2 shows the distribution of estimated excess mortality rates over the first 2 y of ART, taking into account baseline CD4 count, clinical stage, age, and sex. 34% of patients were exposed to excess mortality rates between four and six additional deaths per 100 person-years, 25% to rates below four per 100 person-years, and 41% to rates above six per 100 person-years. Table S2 gives excess mortality rates over 2 y by baseline CD4 count, clinical stage, and by sex and age group. 10.1371/journal.pmed.1000066.g002 Figure 2 Distribution of excess mortality over the first 2 y of ART in patients starting ART in five treatment programmes in sub-Saharan Africa. Standardised Mortality 10.1371/journal.pmed.1000066.t004 Table 4 Excess mortality per 100 person-years by time period on ART, baseline CD4 count, and clinical stage of disease. CD4 Count (Cells/µl) Clinical Stage Time after Starting ART (mo) 1–3 4–6 7–12 13–24 Overall (1–24) <25 Advanced 63.79 (44.67–91.10) 15.87 (8.62–29.22) 7.99 (4.87–13.09) 4.94 (3.39–7.21) 17.5 (14.5–21.1) — Less advanced 18.25 (9.15–36.41) 4.54 (1.91–10.79) 2.29 (0.96–5.43) 1.41 (0.75–2.67) 4.87 (2.64–9.00) 25–49 Advanced 38.32 (25.15–58.38) 14.36 (8.49–24.28) 7.87 (3.98–15.57) 2.70 (1.18–6.16) 12.1 (9.09–16.0) — Less advanced 10.96 (5.34–22.50) 4.11 (1.81–9.35) 2.25 (0.83–6.11) 0.77 (0.26–2.28) 3.36 (1.74–6.49) 50–99 Advanced 21.86 (11.39–41.97) 8.80 (4.46–17.36) 4.55 (2.22–9.33) 3.18 (1.65–6.12) 7.38 (4.98–10.95) — Less advanced 6.25 (2.49–15.70) 2.52 (0.98–6.44) 1.30 (0.45–3.77) 0.91 (0.36–2.29) 2.05 (0.98–4.31) 100–199 Advanced 13.73 (7.20–26.19) 7.52 (4.65–12.18) 2.71 (1.54–4.79) 1.81 (0.94–3.50) 4.83 (3.56–6.56) — Less advanced 3.93 (1.57–9.84) 2.15 (0.95–4.87) 0.78 (0.34–1.80) 0.52 (0.23–1.17) 1.35 (0.70–2.59) ≥200 Advanced 10.20 (7.55–13.77) 3.50 (1.90–6.45) 3.12 (0.19–5.01) 0.96 (0.37–2.49) 3.59 (2.82–4.56) — Less advanced 2.92 (1.53–5.58) 1.00 (0.43–2.35) 0.89 (0.48–1.66) 0.27 (0.08–0.94) 1.00 (0.55–1.81) Overall Overall 21.20 (19.21–23.38) 7.58 (6.48–8.86) 3.79 (2.93–4.90) 2.15 (1.79–2.58) 6.95 (5.95–8.13) Results from Poisson model that included all variables listed and allowed for interaction between baseline CD4 cell count and time after starting ART. SMRs, overall and stratified by time period on ART, baseline CD4 cell count, and clinical stage of disease are shown in Table 5. The overall SMR over the first 2 y was 18.7 (17.7–19.8), declining from 130.0 (110.9–152.4) to 4.0 (3.3–5.0) over months 1–3 to months 13–24, respectively. Over the first 3 mo, SMRs varied between 552.7 (400.1–763.5) for patients starting ART with worst prognosis to 30.2 (15.7–58.0) among patients starting with best prognosis. In the second year on ART, SMRs for these two patients groups were 11.5 (7.95–16.7) and 1.14 (0.47–2.77), respectively. Over the full first 2 y and depending on CD4 count and clinical stage of disease, SMRs varied between 47.1 (39.1–56.6) and 3.4 (1.9–6.2). Table S3 gives SMRs over 2 y by baseline CD4 count, clinical stage, and by sex and age group. 10.1371/journal.pmed.1000066.t005 Table 5 SMRs by time period on ART, baseline CD4 count, and clinical stage of disease. CD4 Count (Cells/µl) Clinical Stage Time Period (mo) 1–3 4–6 7–12 13–24 Overall (1–24) <25 Advanced 552.7 (400.1–763.5) 142.7 (85.3–238.7) 37.2 (22.3–62.0) 11.5 (7.95–16.7) 47.1 (39.1–56.6) Less advanced 186.3 (99.3–349.2) 48.1 (22.7–102.0) 12.5 (5.52–28.4) 3.88 (2.10–7.17) 15.8 (8.99–27.9) 25–49 Advanced 333.1 (233.3–475.5) 130.4 (79.9–212.6) 37.2 (20.1–68.9) 7.01 (3.51–14.0) 31.4 (26.1–37.7) Less advanced 112.3 (59.9–210.4) 43.9 (20.7–93.1) 12.5 (5.17–30.3) 2.36 (0.95–5.85) 10.6 (6.08–18.4) 50–99 Advanced 192.2 (108.5–340.5) 80.4 (44.5–145.1) 22.6 (11.7–43.6) 8.04 (4.73–13.7) 19.6 (15.1–25.5) Less advanced 64.8 (28.9–145.0) 27.1 (11.9–61.7) 7.61 (2.95–19.6) 2.71 (1.24–5.90) 6.59 (3.58–12.1) 100–199 Advanced 123.0 (70.6–214.4) 70.6 (46.7–106.8) 14.5 (8.67–24.1) 5.34 (3.46–8.23) 13.6 (11.5–16.1) Less advanced 41.5 (18.7–91.9) 23.8 (11.8–48.1) 4.87 (2.29–10.4) 1.80 (0.98–3.31) 4.57 (2.67–7.84) ≥200 Advanced 89.5 (62.1–129.0) 34.3 (18.4–63.8) 16.1 (11.2–23.1) 3.39 (1.79–6.40) 10.2 (7.63–13.7) Less advanced 30.2 (15.7–58.0) 11.5 (4.98–26.8) 5.43 (3.13–9.43) 1.14 (0.47–2.77) 3.44 (1.91–6.17) Overall Overall 130.0 (110.9–152.4) 49.6 (42.2–58.3) 13.4 (10.4–17.3) 4.05 (3.25–5.04) 18.7 (17.7–19.8) Sensitivity Analyses When restricting the analysis to the three treatment programmes with rates of loss to follow-up below 10% (Khayelitsha, Gugulethu, Connaught), estimates of excess mortality and SMRs were somewhat lower, but the variation with time period, baseline CD4, and clinical stage was similar to that observed using all data (Tables S4 and S5). For example, in the second year on ART excess mortality in the patients group with the best prognosis was 0.15 (0.015–1.50) per 100 person-years and the SMR was 0.76 (0.18–3.10). Discussion In this collaborative study of five treatment programmes in four countries in sub-Saharan Africa, the mortality of HIV-infected patients starting ART could be compared with that estimated for the corresponding non-HIV–infected general populations. In these countries, a large proportion of deaths among young and middle-aged adults are HIV-related. We found that mortality during the first 2 y of ART was more than 18 times higher than in the general population not infected by HIV. However, there was large variability between prognostic groups and over time: in patients with very low CD4 counts and advanced clinical disease, mortality was increased over 300 times in the first 3 mo of treatment, whereas in the second year of ART, patients who started with high CD4 counts and less advanced disease had mortality rates that were comparable to those estimated for non-HIV–infected individuals. We used excess mortality rates as well as SMRs and thus took the background mortality in the general population into account. The calculation of expected numbers of deaths was restricted to people not infected with HIV, which is crucial when the prevalence of the exposure (HIV infection) in the general population is high and SMRs are large [25]. The mortality of over 13,000 patients was analyzed, including women and men, teenagers and middle-aged people, and patients with severe and less pronounced immunodeficiency. Our results should therefore be applicable to many other patients receiving ART in sub-Saharan Africa. We used estimates of non-HIV–related mortality from the WHO Global Burden of Disease project [17]. Beginning with the year 1999, WHO has been producing annual life tables for all member states. A key use of these tables is the calculation of healthy life expectancy, the basic indicator of population health published each year in the World Health Report [18]. One limitation of our study is that the reference rates for HIV-unrelated mortality are unlikely to be completely accurate for the source populations from which the HIV-infected patients originate, and that errors in the calculation of expected number of deaths are not reflected in the confidence limits of SMRs and excess mortality rates [26]. The five ART programmes included in this study are public sector scale-up programmes, which serve disadvantaged urban populations. Data from the 1970s and early 1980s suggest that adult mortality is lower in urban Africa than in rural Africa [27]. The generally lower mortality rates observed in urban settings may, however, conceal pockets of poverty and high mortality among urban dwellers [27]. Nevertheless, the use of national rates may have lead to estimates of the expected number of HIV-unrelated deaths that are too high, and SMRs and excess mortality rates that are too low. Given that reliable local mortality data are not available, we believe that the data from the Global Burden of Disease project are the best reference data available. Of note, the estimates used in this study for South Africa are in line with those from other analyses. For example, a recent modelling study of the demographic impact of HIV/AIDS in South Africa by the University of Cape Town and the South African Medical Research Council estimated that in 2006, 71% of deaths in the 15–49 y age group were due to HIV infection [28]. Similarly, a study of AIDS-related mortality in rural KwaZulu-Natal estimated that 127 of 186 deaths (68%) were attributable to AIDS in 2004 [29]. A demographic surveillance study using verbal autopsy in the Agincourt subdistrict, rural South Africa, also found that HIV and tuberculosis were the leading causes of death in people aged 15–49 y [30]. Our study has other limitations. Complete ascertainment of risk factors and deaths and complete follow-up of patients is difficult to achieve in treatment programmes in low-income countries [31],[32]. Loss to follow-up was particularly high in one programme in Malawi, however, this is probably due to a higher rate of transfer out of patients in this programme. At present we cannot distinguish between loss to follow-up and transfer to another programme; this will be remedied in the next update of the database. We used multiple imputation to deal with missing baseline CD4 cell counts and loss to follow-up. This method assumes that missing values can accurately be predicted using the available data. In other words, the probability of missing no longer depends on the missing value after taking the available data into account (“missing at random” in Rubin's terminology [33]). The plausibility of this assumption is unverifiable, but it is clear that mortality is increased in patients lost to follow-up [34]–[36], and unlikely that this can fully be captured by the clinical stage and CD4 cell count at baseline. Of note, sensitivity analyses excluding the sites with high rates of loss to follow-up from Malawi and Côte d'Ivoire gave similar results. Follow-up was limited to 2 y in the present analyses, reflecting the relatively recent scale up of ART in sub-Saharan Africa, and it is possible that mortality will increase again in HIV-infected patients with longer duration of treatment. The short follow-up also meant that life expectancy of patients starting ART could not be examined. The ART Cohort Collaboration of HIV cohorts in Europe and North America recently estimated that life expectancy at age 35 y among patients on ART not infected through injecting drug use was 33 y [37]. These questions will be addressed in future analyses of the IeDEA databases. Finally, our analysis did not consider differences between the HIV-infected and non-HIV–infected populations other than gender and age. In industrialised countries, there are important differences in the prevalence of risk factors, for example smoking, between infected and noninfected populations. In sub-Saharan Africa, where the epidemic is generalised and transmission by heterosexual contacts, differences in lifestyle factors are unlikely to be a major source of bias. How do these SMRs compare with other population groups at increased risk of death due to unhealthy lifestyles, occupational exposures, or chronic conditions other than HIV infection? Few data are available for sub-Saharan Africa. White South African gold miners, compared to the white male population, had an SMR of 1.3, because of excess mortality due to lung cancer, chronic obstructive lung disease, and liver cirrhosis [38]. Among male British doctors born in the 1920s, the probability of dying from any cause in middle age was three times higher in smokers than lifelong nonsmokers [39]. Similarly, an analysis of the National Alcohol Survey in the US showed that regular, heavy drinkers had mortality rates from all causes that were 2.2 times higher than those observed in lifetime abstainers [40]. The mortality of people with a body mass index (BMI) over 35 kg/m2 is increased by factor 1.5 to 2.5, compared to those with a BMI between 20 and 25 kg/m2, and a similar increase in all-cause mortality is found in physically inactive people compared to physically active individuals [41]. In a population-based study in Turin, Northern Italy, women with type 1 diabetes had an SMR for all causes of 3.4 and men an SMR of 2.0 [42]. The SMRs found in these patients and populations exposed to risk factors are thus quite comparable to those found in some of the patient groups included in our analysis. Excess mortality was greater among men than among women. A recent analysis from the ART in Lower Income Countries (ART-LINC) collaboration found that although women are more vulnerable than men to becoming infected with HIV, they were equally or more likely than men to start ART [43]. Women were younger and started treatment at a less advanced clinical stage, which could partly explain their lower excess mortality. Gender inequities in health may affect men as well as women: traditional masculine roles cast men as taking risks, being unconcerned about their health, and not needing help or healthcare [44]. Conventional views of gender inequality might have made it easier for women than men in some settings to become engaged with HIV diagnosis and treatment services [43],[45],[46]. Clearly, continued efforts are needed to empower women and secure their rights to treatment and care for HIV infection. However, more attention needs to be paid to HIV-infected men. Although some HIV-infected patients starting ART in sub-Saharan Africa experienced mortality rates that were comparable with those experienced by other patients with a chronic condition, early mortality in adults starting ART continues to be high in sub-Saharan Africa [47]. Many patients start treatment late, with a history of AIDS defining illnesses and low CD4 cell counts. Leading causes of death include tuberculosis, acute sepsis, cryptococcal meningitis, malignancies, and wasting syndrome [47]. Of note, the Starting Antiretrovirals at three Points in Tuberculosis (SAPIT) trial recently showed that mortality among patients co-infected with tuberculosis and HIV can be reduced by 55% if ART is provided with TB treatment [48]. Although our study cannot determine the CD4 cell count when ART should be started in order to minimise mortality, much of the excess mortality observed in our study would probably be preventable with timely initiation of ART. Further expansion of public health strategies to increase access to ART in sub-Saharan Africa is therefore urgently needed. In collaboration with the Global Burden of Disease project, the IeDEA network will continue to monitor mortality of HIV-infected patients starting ART and compare their mortality to that of the general population not infected by HIV. Supporting Information Table S1 Age- and sex-specific HIV-unrelated mortality per 100 population in Côte d'Ivoire, Malawi, Zimbabwe, and South Africa, 2004. Data from the Global Burden of Disease study [17],[20]. (0.05 MB DOC) Click here for additional data file. Table S2 Excess mortality per 100 person-years for months 1–24 by baseline CD4 count and clinical stage of disease, and by sex and age group. (0.06 MB DOC) Click here for additional data file. Table S3 SMRs for months 1–24 by baseline CD4 count and clinical stage of disease, and by sex and age group. (0.06 MB DOC) Click here for additional data file. Table S4 Excess mortality per 100 person-years by time period on ART, baseline CD4 count, and clinical stage of disease in the three ART programmes with low rates of loss to follow-up (Connaught, Gugulethu, Khayelitsha). (0.04 MB DOC) Click here for additional data file. Table S5 SMRs by time period on ART, baseline CD4 count, and clinical stage of disease in the three ART programmes with low rates of loss to follow-up (Connaught, Gugulethu, Khayelitsha). (0.04 MB DOC) Click here for additional data file.
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              Antiretroviral therapy in resource-limited settings 1996 to 2006: patient characteristics, treatment regimens and monitoring in sub-Saharan Africa, Asia and Latin America.

              To describe temporal trends in baseline clinical characteristics, initial treatment regimens and monitoring of patients starting antiretroviral therapy (ART) in resource-limited settings. We analysed data from 17 ART programmes in 12 countries in sub-Saharan Africa, South America and Asia. Patients aged 16 years or older with documented date of start of highly active ART (HAART) were included. Data were analysed by calculating medians, interquartile ranges (IQR) and percentages by regions and time periods. Not all centres provided data for 2006 and 2005 and 2006 were therefore combined. A total of 36,715 patients who started ART 1996-2006 were included in the analysis. Patient numbers increased substantially in sub-Saharan Africa and Asia, and the number of initial regimens declined, to four and five, respectively, in 2005-2006. In South America 20 regimes were used in 2005-2006. A combination of 3TC/D4T/NVP was used for 56% of African patients and 42% of Asian patients; AZT/3TC/EFV was used in 33% of patients in South America. The median baseline CD4 count increased in recent years, to 122 cells/microl (IQR 53-194) in 2005-2006 in Africa, 134 cells/microl (IQR 72-191) in Asia, and 197 cells/microl (IQR 61-277) in South America, but 77%, 78% and 51%, respectively, started with <200 cells/microl in 2005-2006. In all regions baseline CD4 cell counts were higher in women than men: differences were 22cells/microl in Africa, 65 cells/microl in Asia and 10 cells/microl in South America. In 2005-2006 a viral load at 6 months was available in 21% of patients Africa, 8% of Asian patients and 73% of patients in South America. Corresponding figures for 6-month CD4 cell counts were 74%, 77% and 81%. The public health approach to providing ART proposed by the World Health Organization has been implemented in sub-Saharan Africa and Asia. Although CD4 cell counts at the start of ART have increased in recent years, most patients continue to start with counts well below the recommended threshold. Particular attention should be paid to more timely initiation of ART in HIV-infected men.
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                Author and article information

                Journal
                J Int AIDS Soc
                J Int AIDS Soc
                JIAS
                Journal of the International AIDS Society
                International AIDS Society
                1758-2652
                15 December 2014
                2014
                : 17
                : 1
                : 19045
                Affiliations
                [1 ]Department of Biomedical Informatics, Vanderbilt School of Medicine, Nashville, TN, USA
                [2 ]Department of Life Sciences, Truven Health Analytics, Cambridge, MA, USA
                [3 ]School of Public Health, City University of New York, New York, NY, USA
                [4 ]Department of Pediatrics, Vanderbilt School of Medicine, Nashville, TN, USA
                [5 ]Department of Health Policy, Vanderbilt School of Medicine, Nashville, TN, USA
                [6 ]Department of Biostatistics, Vanderbilt School of Medicine, Nashville, TN, USA
                [7 ]Vanderbilt Institute for Global Health (VIGH), Nashville, TN, USA
                [8 ]Department of Medicine, Division of Infectious Diseases, Vanderbilt School of Medicine, Nashville, TN, USA
                [9 ]Department of Medicine, Indiana University School of Medicine, Indianapolis, IN, USA
                [10 ]Université de Bordeaux, ISPED, centre Inserm U897 Épidémiologie-Biostatistique, 33000 Bordeaux, France
                [11 ]Programme PAC-CI, Site ANRS de Côte d’Ivoire, Abidjan, Côte d’Ivoire
                [12 ]Université de Lomé, Faculté des Sciences de la Santé, Départment de Santé Publique, Lomé, Togo
                [13 ]Institute of Social and Preventive Medicine (ISPM), University of Bern, Bern, Switzerland
                [14 ]Research Triangle Institute, Raleigh, NC, USA
                [15 ]Kirby Institute, University of New South Wales, Sydney, Australia
                [16 ]Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA
                [17 ]Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health Baltimore, MD, USA
                [18 ]Epidemiology and Biostatistics Program, Hunter College, City University of New York, New York, NY, USA
                [19 ]Doctor of Public Health Programs (CUNY SPH), School of Public Health, City University of New York, New York, NY, USA
                Author notes
                [§ ] Corresponding author: Stephany N Duda, Vanderbilt University, 2525 West End Ave., Suite 1050, Nashville, TN 37203, USA. Tel: +1 615 322 7854. ( stephany.duda@ 123456vanderbilt.edu )
                Article
                19045
                10.7448/IAS.17.1.19045
                4268491
                25516092
                8db8f1b8-fd76-4ff7-8b84-5083c6e06d21
                © 2014 Duda SN et al; licensee International AIDS Society

                This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 24 February 2014
                : 28 July 2014
                : 20 August 2014
                Categories
                Research Article

                Infectious disease & Microbiology
                hiv/aids,hiv care capacity,clinic characteristics,comprehensive care,resource-limited settings

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