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      Variability of Non-Polar Secondary Metabolites in the Red Alga Portieria

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          Abstract

          Possible sources of variation in non-polar secondary metabolites of Portieria hornemannii, sampled from two distinct regions in the Philippines (Batanes and Visayas), resulting from different life-history stages, presence of cryptic species, and/or spatiotemporal factors, were investigated. PCA analyses demonstrated secondary metabolite variation between, as well as within, five cryptic Batanes species. Intraspecific variation was even more pronounced in the three cryptic Visayas species, which included samples from six sites. Neither species groupings, nor spatial or temporal based patterns, were observed in the PCA analysis, however, intraspecific variation in secondary metabolites was detected between life-history stages. Male gametophytes (102 metabolites detected) were strongly discriminated from the two other stages, whilst female gametophyte (202 metabolites detected) and tetrasporophyte (106 metabolites detected) samples were partially discriminated. These results suggest that life-history driven variations, and possibly other microscale factors, may influence the variation within Portieria species.

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          Most cited references66

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          The program MRBAYES performs Bayesian inference of phylogeny using a variant of Markov chain Monte Carlo. MRBAYES, including the source code, documentation, sample data files, and an executable, is available at http://brahms.biology.rochester.edu/software.html.
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            Metabolites are the end products of cellular regulatory processes, and their levels can be regarded as the ultimate response of biological systems to genetic or environmental changes. In parallel to the terms 'transcriptome' and proteome', the set of metabolites synthesized by a biological system constitute its 'metabolome'. Yet, unlike other functional genomics approaches, the unbiased simultaneous identification and quantification of plant metabolomes has been largely neglected. Until recently, most analyses were restricted to profiling selected classes of compounds, or to fingerprinting metabolic changes without sufficient analytical resolution to determine metabolite levels and identities individually. As a prerequisite for metabolomic analysis, careful consideration of the methods employed for tissue extraction, sample preparation, data acquisition, and data mining must be taken. In this review, the differences among metabolite target analysis, metabolite profiling, and metabolic fingerprinting are clarified, and terms are defined. Current approaches are examined, and potential applications are summarized with a special emphasis on data mining and mathematical modelling of metabolism.
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              This review covers the literature published in 2005 for marine natural products, with 704 citations (493 for the period January to December 2005) referring to compounds isolated from marine microorganisms and phytoplankton, green algae, brown algae, red algae, sponges, coelenterates, bryozoans, molluscs, tunicates and echinoderms. The emphasis is on new compounds (812 for 2005), together with their relevant biological activities, source organisms and country of origin. Biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.
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                Author and article information

                Journal
                Mar Drugs
                MD
                Marine Drugs
                Molecular Diversity Preservation International
                1660-3397
                2011
                21 November 2011
                : 9
                : 11
                : 2438-2468
                Affiliations
                [1 ]Phycology Research Group, Ghent University, Krijgslaan 281, S8, 9000 Ghent, Belgium; E-Mail: jm2marine@ 123456yahoo.com
                [2 ]Institute of Environmental and Marine Sciences, Silliman University, Dumaguete City 6200, Philippines; E-Mail: hpcalumpong@ 123456yahoo.com
                Author notes
                [* ]Authors to whom correspondence should be addressed; E-Mails: dioli_20@ 123456yahoo.com (D.A.P.); olivier.declerck@ 123456ugent.be (O.d.C.); Tel.: +32-9-264-8500 (O.d.C.); Fax: +32-9-264-8599 (O.d.C.).
                Article
                marinedrugs-09-02438
                10.3390/md9112438
                3229244
                22163195
                f9462c9f-b432-4466-bd6d-12f0ccc3b569
                © 2011 by the authors; licensee MDPI, Basel, Switzerland

                This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license ( http://creativecommons.org/licenses/by/3.0/).

                History
                : 17 August 2011
                : 01 November 2011
                : 08 November 2011
                Categories
                Article

                Pharmacology & Pharmaceutical medicine
                portieria,life-history stages,secondary metabolite,variation,cryptic species

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