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Abstract
2013/14 saw the start of the introduction of a new live attenuated influenza vaccine
(LAIV) programme for children in England. 2018/19 saw co-circulation of both A(H1N1)pdm09
and A(H3N2), when LAIV was offered to all healthy children 2-9 years of age. LAIV
effectiveness against influenza hospitalisation is not well described. This paper
presents the 2018/19 end-of-season adjusted vaccine effectiveness (aVE) against laboratory
confirmed influenza related hospitalisation in children aged 2-17. The test negative
case control approach was used to estimate aVE by influenza A subtype and vaccine
type. Cases and controls were selected from a sentinel laboratory surveillance system
which collates details of individuals tested for influenza with reverse-transcription
polymerase chain reaction (RT-PCR) on respiratory samples. Vaccine and clinical history
was obtained from general practitioners of study participants. There were 307 hospitalised
cases and 679 hospitalised controls. End-of-season influenza aVE was 53.0% (95% CI:
33.3, 66.8) against influenza confirmed hospitalisation; 63.5% (95% CI: 34.4, 79.7)
against influenza A(H1N1)pdm09 hospitalisation and 31.1% (95% CI: -53.9, 69.2) against
influenza A(H3N2). LAIV aVE was 49.1% (95% CI: 25.9, 65.0) for any influenza and 70.7%
(95% CI: 41.8, 85.3) for A(H1N1)pdm09, whereas for those receiving quadrivalent inactivated
influenza vaccine (QIV), aVE was 64.4% (95% CI: 29.4, 82.0) and 44.4% (95% CI: -51.9,
79.6) respectively. We provide evidence of overall significant VE for both LAIV and
QIV against influenza associated hospitalisation in children 2-17 years of age, most
notably against influenza A(H1N1)pdm09, with non-significant protection against A(H3N2).